GlyConnect

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taxonomy (1) protein (1) source (0) structure (1) composition (1) disease (0) reference (1) site (1) peptide (0)

Taxonomy

Caenorhabditis elegans

Protein

Uncharacterized protein / Caenorhabditis elegans

Source

Reported structure

O-Linked / Core 9 / GlcA(b1-3)Gal(b1-3)[Gal(b1-6)]GalNAc

Composition

Hex:2 HexNAc:1 HexA:1 (avg mass : 721.621 )

Disease

Reference

The nematode Caenorhabditis elegans synthesizes unusual O-linked glycans: identification of glucose-substituted mucin-type O-glycans and short chondroitin-like oligosaccharides (2001 - Guerardel, Balanzino, Maes, Leroy, Coddeville, Oriol, Strecker) / Status : Reviewed

Reported glycosite

Uncharacterized protein / Caenorhabditis elegans
- Undefined site

Mass spectrometry observed peptide

- O-Linked / Core 9 (avg mass : 721.621)

3D structure from GLYCAM

Cross-references

GlyTouCan : G18630FL

GlyGen : -

ChEBI : -

Composition

Hex:2 HexNAc:1 HexA:1

IUPAC

GlcA(b1-3)Gal(b1-3)[Gal(b1-6)]GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:b-dglc-HEX-1:5|6:a
5b:b-dgal-HEX-1:5
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(3+1)4d
4:1o(6+1)5d

GWS

freeEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3b1GlcA)--6b1D-Gal,p$MONO,Und,0,0,freeEnd

Glycam

DGlcp[6A]b1-3DGalpb1-3[DGalpb1-6]DGalpNAca1-OH