GlyConnect

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taxonomy (2) protein (2) source (2) structure (1) composition (1) disease (0) reference (2) site (2) peptide (0)

Taxonomy

Equus caballus (Domestic horse)
Mus musculus (House mouse)

Protein

Source

Reported structure

O-Linked / Undefined core / NeuGc(?2-3)Gal(?1-3)[NeuGc(?2-6)]GalNAc

Composition

Hex:1 HexNAc:1 NeuGc:2 (avg mass : 997.8673 )

Disease

Reference

Structural analysis of murine zona pellucida glycans. Evidence for the expression of core 2-type O-glycans and the Sd(a) antigen. (2000 - Easton RL, Patankar MS, Lattanzio FA, Leaven TH, Morris HR, Clark GF, Dell A) / Status : Reviewed
Isolation and characterization of alkali-labile oligosaccharide units from horse glycophorin. (1980 - Fukuda K, Tomita M, Hamada A) / Status : Reviewed

Reported glycosite

Glycophorin / Equus caballus
- Undefined site
Zona pellucida sperm-binding protein matrix / Mus musculus
- Undefined site

Mass spectrometry observed peptide

- O-Linked / Undefined core (avg mass : 997.8673)

3D structure from GLYCAM

Cross-references

GlyTouCan : G02752WS

GlyGen : G02752WS

ChEBI : 156785

Composition

Hex:1 HexNAc:1 NeuGc:2

IUPAC

NeuGc(?2-3)Gal(?1-3)[NeuGc(?2-6)]GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:x-dgal-HEX-1:5
4b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
5s:n-glycolyl
6b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
7s:n-glycolyl
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(3+2)4d
4:4d(5+1)5n
5:1o(6+2)6d
6:6d(5+1)7n

GWS

freeEnd--?a1D-GalNAc,p(--3?1D-Gal,p--3?2D-NeuGc,p)--6?2D-NeuGc,p$MONO,Und,0,0,freeEnd