GlyConnect

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taxonomy (23) protein (26) source (7) structure (1) composition (1) disease (0) reference (9) site (26) peptide (0)

Taxonomy

Protein

Source

Reported structure

N-Linked / Complex / GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)][Xyl(b1-2)]Man(b1-4)GlcNAc(b1-4)GlcNAc

Composition

Hex:3 HexNAc:4 Pent:1 (avg mass : 1449.3386 )

Disease

Reference

Protein N-glycosylation is similar in the moss Physcomitrella patens and in higher plants. (2003 - Vietor R, Loutelier-Bourhis C, Fitchette AC, Margerie P, Gonneau M, Faye L, Lerouge P) / Status : Reviewed
Analysis of Asn-linked glycans from vegetable foodstuffs: widespread occurrence of Lewis a, core alpha1,3-linked fucose and xylose substitutions. (2001 - Wilson IB, Zeleny R, Kolarich D, Staudacher E, Stroop CJ, Kamerling JP, Altmann F) / Status : Reviewed
Glycoproteins secreted from suspension-cultured tobacco BY2 cells have distinct glycan structures from intracellular glycoproteins. (2001 - Misaki R, Kimura Y, Fujiyama K, Seki T) / Status : Reviewed
N-Glycan analysis by matrix-assisted laser desorption/ionization mass spectrometry of electrophoretically separated nonmammalian proteins: application to peanut allergen Ara h 1 and olive pollen allergen Ole e 1. (2000 - Kolarich D, Altmann F) / Status : Reviewed
Structural analysis of N-glycans from yellow lupin (Lupinus luteus) seed diphosphonucleotide phosphatase/phosphodiesterase. (2000 - Olczak M, Watorek W) / Status : Reviewed
Characterization of N-glycans from Arabidopsis. Application to a fucose-deficient mutant. (1999 - Rayon C, Cabanes-Macheteau M, Loutelier-Bourhis C, Salliot-Maire I, Lemoine J, Reiter W, Lerouge P, Faye L) / Status : Reviewed
Structure and distribution of N-glycans on the S7-allele stylar self-incompatibility ribonuclease of Nicotiana alata. (1998 - Oxley D, Munro S, Craik D, Bacic A) / Status : Reviewed
Structure of N-glycans on the S3- and S6-allele stylar self-incompatibility ribonucleases of Nicotiana alata. (1996 - Oxley D, Munro S, Craik D, Bacic A) / Status : Reviewed
Structure and biosynthesis of the xylose-containing carbohydrate moiety of rice alpha-amylase. (1990 - Hayashi M, Tsuru A, Mitsui T, Takahashi N, Hanzawa H, Arata Y, Akazawa T) / Status : Reviewed

Reported glycosite

Uncharacterized protein / Actinidia chinensis
- Undefined site
Uncharacterized protein / Apium graveolens var. oulce
- Undefined site
Uncharacterized protein / Lycopersicon esculentum
- Undefined site
Ribonuclease s-3 / Nicotiana alata
- Undefined site
Ribonuclease s-6 / Nicotiana alata
- Undefined site
Ribonuclease s-7 / Nicotiana alata
- Asn-59
Uncharacterized protein / Nicotiana tabacum
- Undefined site
Major protein allergan / Olea europaea
- Asn-111
Uncharacterized protein / Physomitrella patens
- Undefined site
Uncharacterized protein / Fagopyrum esculentum
- Undefined site
Uncharacterized protein / Persea americana
- Undefined site
Uncharacterized protein / Allium cepa
- Undefined site
Uncharacterized protein / Asparagus officinalis
- Undefined site
Uncharacterized protein / Musa acuminata
- Undefined site
Alpha-amylase / Oryza sativa
- Undefined site
Uncharacterized protein / Arabidopsis thaliana
- Undefined site
Uncharacterized protein / Arabidopsis thaliana
- Undefined site
Uncharacterized protein / Brassica oleracea var. botrytis
- Undefined site
Uncharacterized protein / Citrus sinensis
- Undefined site
Uncharacterized protein / Corylus avellana
- Undefined site
Uncharacterized protein / Fragaria x ananassa
- Undefined site
Uncharacterized protein / Juglans regia
- Undefined site
Diphosphonucleotide phosphatase / phosphodiesterase / Lupinus luteus
- Undefined site
Uncharacterized protein / Malus domestica var. golden delicious
- Undefined site
Uncharacterized protein / Pisum sativum
- Undefined site
Uncharacterized protein / Pyrus communis var. williams
- Undefined site

Mass spectrometry observed peptide

- N-Linked / Complex (avg mass : 1449.3386)

3D structure from GLYCAM

Cross-references

GlyTouCan : G93351GM

GlyGen : -

ChEBI : -

Composition

Hex:3 HexNAc:4 Pent:1

IUPAC

GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)][Xyl(b1-2)]Man(b1-4)GlcNAc(b1-4)GlcNAc

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:b-dxyl-PEN-1:5
7b:a-dman-HEX-1:5
8b:b-dglc-HEX-1:5
9s:n-acetyl
10b:a-dman-HEX-1:5
11b:b-dglc-HEX-1:5
12s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(2+1)6d
6:5o(3+1)7d
7:7o(2+1)8d
8:8d(2+1)9n
9:5o(6+1)10d
10:10o(2+1)11d
11:11d(2+1)12n

GWS

freeEnd--?b1D-GlcNAc,p--4b1D-GlcNAc,p--4b1D-Man,p((--2b1D-Xyl,p)--3a1D-Man,p--2b1D-GlcNAc,p)--6a1D-Man,p--2b1D-GlcNAc,p$MONO,Und,0,0,freeEnd

Glycam

DGlcpNAcb1-2DManpa1-3[DGlcpNAcb1-2DManpa1-6][DXylpb1-2]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-OH