GlyConnect

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taxonomy (2) protein (2) source (2) structure (1) composition (1) disease (0) reference (2) site (2) peptide (0)

Taxonomy

Homo sapiens (Human)
Rattus norvegicus (Norway rat)

Protein

Source

Brain (UBERON_0000955)
Erythrocyte (CL_0000232) Plasma Membrane (GO_0005886)

Reported structure

O-Linked / Core 1 / NeuAc(?2-3)Gal(b1-3)GalNAc

Composition

Hex:1 HexNAc:1 NeuAc:1 (avg mass : 674.6106 )

Disease

Reference

Structure of the O-glycosidically linked carbohydrate units of rat brain glycoproteins. (1975 - Finne J) / Status : Reviewed
Structural studies on human erythrocyte glycoproteins. Alkali-labile oligosaccharides. (1969 - Thomas D, Winzler R) / Status : Reviewed

Reported glycosite

Uncharacterized protein / Homo sapiens
- Undefined site
Uncharacterized protein from Brain / Rattus norvegicus
- Undefined site

Mass spectrometry observed peptide

- O-Linked / Core 1 (avg mass : 674.6106)

3D structure from GLYCAM

Cross-references

GlyTouCan : G99556PB

GlyGen : G99556PB

ChEBI : 157297

Composition

Hex:1 HexNAc:1 NeuAc:1

IUPAC

NeuAc(?2-3)Gal(b1-3)GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
5s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(3+2)4d
4:4d(5+1)5n

GWS

freeEnd--?a1D-GalNAc,p--3b1D-Gal,p--3?2D-NeuAc,p$MONO,Und,0,0,freeEnd