GlyConnect

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taxonomy (1) protein (1) source (1) structure (1) composition (1) disease (0) reference (1) site (1) peptide (0)

Disease

Reference

Primary structure of acidic oligosaccharide-alditols derived from the jelly coat of Ambystoma tigrinum. Occurrence of oligosaccharides with fucosyl(alpha 1-5)[fucosyl(alpha 1-4)]-3-deoxy-D-glycero-D-galacto- nonulosonic acid and fucosyl(alpha 1-2) galactosyl (alpha 1-3)-N- acetylgalactosamine sequen (1995 - Maes E, Plancke Y, Deplace F, Strecker G) / Status : Reviewed

Reported glycosite

Mucin / Ambystoma tigrinum
- Undefined site

Mass spectrometry observed peptide

- O-Linked / Core 8 (avg mass : 925.844)

3D structure from GLYCAM

Cross-references

GlyTouCan : G49070MY

GlyGen : -

ChEBI : -

Composition

Hex:1 HexNAc:1 dHex:2 Kdn:1

IUPAC

Fuc(a1-2)Gal(a1-3)[Fuc(a1-4)Kdn(a2-6)]GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:a-dgal-HEX-1:5
4b:a-lgal-HEX-1:5|6:d
5b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d
6b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(2+1)4d
4:1o(6+2)5d
5:5o(4+1)6d

GWS

freeEnd--?a1D-GalNAc,p(--3a1D-Gal,p--2a1L-Fuc,p)--6a2D-KDN,p--4a1L-Fuc,p$MONO,Und,0,0,freeEnd

Structure

Details for this Core 8 / O-Linked glycan structure

Taxonomy

Protein

Source

Reported structure

Composition

Disease

Reference

Reported glycosite

Mass spectrometry observed peptide

Source

Reference

Reported glycosite

3D structure from GLYCAM

Cross-references

Composition

IUPAC

GlycoCT

GWS