GlyConnect

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taxonomy (3) protein (3) source (1) structure (1) composition (1) disease (0) reference (1) site (3) peptide (0)

Taxonomy

Protein

Disease

Reference

Structures of the carbohydrate units of polysialoglycoproteins isolated from the eggs of four species of salmonid fishes. (1985 - Iwasaki M, Inoue S) / Status : Reviewed

Reported glycosite

Polysialoglycoprotein (psgp) / Oncorhynchus masou ishikawai
- Undefined site
Polysialoglycoprotein (psgp) / Oncorhynchus mykiss
- Undefined site
Polysialoglycoprotein (psgp) / Oncorhynchus nerka adonis
- Undefined site

Mass spectrometry observed peptide

- O-Linked / Core 1 (avg mass : 748.6901)

3D structure from GLYCAM

Cross-references

GlyTouCan : G23006CO

GlyGen : -

ChEBI : -

Composition

Hex:2 HexNAc:2

IUPAC

GalNAc(b1-3)Gal(b1-4)Gal(b1-3)GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:b-dgal-HEX-1:5
5b:b-dgal-HEX-1:5
6s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(4+1)4d
4:4o(3+1)5d
5:5d(2+1)6n

GWS

freeEnd--?a1D-GalNAc,p--3b1D-Gal,p--4b1D-Gal,p--3b1D-GalNAc,p$MONO,Und,0,0,freeEnd

Glycam

DGalpNAcb1-3DGalpb1-4DGalpb1-3DGalpNAca1-OH

Structure

Details for this Core 1 / O-Linked glycan structure

Taxonomy

Protein

Source

Reported structure

Composition

Disease

Reference

Reported glycosite

Mass spectrometry observed peptide

Source

Reference

Reported glycosite

3D structure from GLYCAM

Cross-references

Composition

IUPAC

GlycoCT

GWS

Glycam