GlyConnect

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taxonomy (2) protein (2) source (1) structure (1) composition (1) disease (0) reference (1) site (4) peptide (0)

Disease

Reference

Identification of protein O-glycosylation site and corresponding glycans using liquid chromatography-tandem mass spectrometry via mapping accurate mass and retention time shift (2014 - Huang LJ, Lin JH, Tsai JH, Chu YY, Chen YW, Chen SL, Chen SH) / Status : Reviewed

Reported glycosite

Coagulation factor IX / Homo sapiens
- Thr-85
- Thr-205
- Thr-215
Kappa casein / Bos taurus
- Thr-152

Mass spectrometry observed peptide

- O-Linked / Core 2 (avg mass : 1039.948)

Cross-references

GlyTouCan : G10651WD

Composition

Hex:2 HexNAc:2 NeuAc:1

IUPAC

Gal(?1-?)GlcNAc(?1-?)[Neu5Ac(?2-?)Gal(?1-?)]GalNAc(?1-

GlycoCT

RES
1b:x-dgal-HEX-1:5
2b:x-dglc-HEX-1:5
3b:x-dgal-HEX-1:5
4s:n-acetyl
5b:x-dgal-HEX-1:5
6b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
7s:n-acetyl
8s:n-acetyl
LIN
1:1o(-1+1)2d
2:2o(-1+1)3d
3:2d(2+1)4n
4:1o(-1+1)5d
5:5o(-1+2)6d
6:6d(5+1)7n
7:1d(2+1)8n

Structure

Details for this Core 2 / O-Linked glycan structure

Taxonomy

Protein

Source

Reported structure

Composition

Disease

Reference

Reported glycosite

Mass spectrometry observed peptide

Source

Reference

Reported glycosite

Cross-references

Composition

IUPAC

GlycoCT