GlyConnect

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taxonomy (1) protein (1) source (1) structure (1) composition (1) disease (0) reference (1) site (1) peptide (0)

Taxonomy

Xenopus tropicalis (Western clawed frog)

Protein

Mucin / Xenopus tropicalis

Source

Egg Cell Jelly Coat

Reported structure

O-Linked / Core 1 / Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)GalNAc

Composition

Hex:1 HexNAc:2 dHex:1 (avg mass : 732.6907 )

Disease

Reference

Identification of the blood group Lewis(a) determinant in the oviducal mucins of Xenopus tropicalis. (2003 - Guérardel Y, Petit D, Madigou T, Guillet B, Maes E, Maftah A, Boujard D, Strecker G, Kol O) / Status : Reviewed

Reported glycosite

Mucin / Xenopus tropicalis
- Undefined site

Mass spectrometry observed peptide

- O-Linked / Core 1 (avg mass : 732.6907)

3D structure from GLYCAM

Cross-references

GlyTouCan : G00371DJ

GlyGen : G00371DJ

ChEBI : -

Composition

Hex:1 HexNAc:2 dHex:1

IUPAC

Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dgal-HEX-1:5
6b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3d(2+1)4n
4:3o(3+1)5d
5:3o(4+1)6d

GWS

freeEnd--?a1D-GalNAc,p--3b1D-GlcNAc,p(--3b1D-Gal,p)--4a1L-Fuc,p$MONO,Und,0,0,freeEnd

Glycam

DGalpb1-3[LFucpa1-4]DGlcpNAcb1-3DGalpNAca1-OH