GlyConnect

taxonomy (1) protein (7) source (3) structure (1) composition (1) disease (5) reference (7) site (19) peptide (0)

Taxonomy

Homo sapiens (Human)

Protein

Source

Blood Plasma (UBERON_0001969)
Blood Serum (UBERON_0001977)
Kidney (UBERON_0002113) HEK293 (CVCL_0045)

Reported structure

N-Linked / Complex / Structure 1519

Composition

Hex:5 HexNAc:4 dHex:1 NeuAc:2 (avg mass : 2370.1661 )

Disease

Reference

Site-specific N-glycosylation analysis of human factor XI: Identification of a noncanonical NXC glycosite (2014 - Faid V, Denguir N, Chapuis V, Bihoreau N, Chevreux G) / Status : Reviewed
Glycoproteomics: Identifying the Glycosylation of Prostate Specific Antigen at Normal and High Isoelectric Points by LC-MS/MS (2014 - Song E, Mayampurath A, Yu CY, Tang H, Mechref Y) / Status : Reviewed
Site-specific N-glycosylation analysis of human immunoglobulin E. (2014 - Plomp R, Hensbergen PJ, Rombouts Y, Zauner G, Dragan I, Koeleman CA, Deelder AM, Wuhrer M) / Status : Reviewed
Site-specific glycan microheterogeneity of inter-alpha-trypsin inhibitor heavy chain H4 (2014 - Chandler KB, Brnakova Z, Sanda M, Wang S, Stalnaker SH, Bridger R, Zhao P, Wells L, Edwards NJ, Goldman R.) / Status : Reviewed
In-depth analysis of site-specific N-glycosylation in vitronectin from human plasma by tandem mass spectrometry with immunoprecipitation (2014 - Hwang H, Lee JY, Lee HK, Park GW, Jeong HK, Moon MH, Kim JY, Yoo JS.) / Status : Reviewed
Computational framework for identification of intact glycopeptides in complex samples (2014 - Mayampurath A, Yu CY, Song E, Balan J, Mechref Y, Tang H.) / Status : Reviewed
Exploring site-specific N-glycosylation microheterogeneity of haptoglobin using glycopeptide CID tandem mass spectra and glycan database search (2013 - Chandler KB1, Pompach P, Goldman R, Edwards N.) / Status : Reviewed

Reported glycosite

Ceruloplasmin / Homo sapiens
- Asn-397
- Asn-762
Coagulation factor XI / Homo sapiens
- Asn-90
- Asn-126
- Asn-450
- Asn-491
Haptoglobin / Homo sapiens
- Asn-184
- Asn-207
- Asn-241
Immunoglobulin epsilon chain c region / Homo sapiens
- Asn-21
- Asn-49
- Asn-99
- Asn-146
- Asn-252
Inter-alpha-trypsin inhibitor heavy chain h4 / Homo sapiens
- Asn-207
- Asn-517
- Asn-577
Prostate-specific antigen (psa-1) / Homo sapiens
- Asn-69
Vitronectin / Homo sapiens
- Asn-242

Mass spectrometry observed peptide

- N-Linked / Complex (avg mass : 2370.1661)

Cross-references

GlyTouCan : G08146BT

UniCarb-DB :

Composition

Hex:5 HexNAc:4 dHex:1 NeuAc:2

IUPAC

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:x-dglc-HEX-1:5
8b:x-dgal-HEX-1:5
9b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
10s:n-acetyl
11s:n-acetyl
12b:a-dman-HEX-1:5
13b:x-dglc-HEX-1:5
14b:x-dgal-HEX-1:5
15b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
16s:n-acetyl
17s:n-acetyl
18b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(-1+1)7d
7:7o(-1+1)8d
8:8o(-1+2)9d
9:9d(5+1)10n
10:7d(2+1)11n
11:5o(6+1)12d
12:12o(-1+1)13d
13:13o(-1+1)14d
14:14o(-1+2)15d
15:15d(5+1)16n
16:13d(2+1)17n
17:1o(6+1)18d