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Structure

Details for this Hybrid / N-Linked glycan structure

SNFG, Text, Oxford
Taxonomy (1) Protein (4) Source (1) Structure (1) Composition (1) Disease (0) Site (4) Peptide (0)

    Taxonomy

  • Gallus gallus (Chicken)

    Protein

  • Ovalbumin / Gallus gallus    P01012
  • Uncharacterized protein from Egg Cell / Gallus gallus
  • Ovomucoid / Gallus gallus    P01005
  • Riboflavin-binding protein / Gallus gallus    P02752

    Source

  • Egg Cell  

    Reported structure

  • N-Linked / Hybrid / Man(a1-3)[Man(a1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)GlcNAc

    Composition

  • Hex:5 HexNAc:4 (avg mass : 1641.5073 )

    Disease

    Reported glycosite

  • Ovalbumin / Gallus gallus :
    •        Undefined site
  • Ovomucoid / Gallus gallus :
    •        Undefined site
  • Uncharacterized protein from Egg Cell / Gallus gallus :
    •        Undefined site
  • Riboflavin-binding protein / Gallus gallus :
    •        Undefined site

    Mass spectrometry validated peptide

  • No image
    • N-Linked / Hybrid (avg mass : 1641.5073 )
    • Site (4)

        Reported glycosite

      • Ovalbumin / Gallus gallus :
        •        Undefined site
      • Ovomucoid / Gallus gallus :
        •        Undefined site
      • Uncharacterized protein from Egg Cell / Gallus gallus :
        •        Undefined site
      • Riboflavin-binding protein / Gallus gallus :
        •        Undefined site

Glycan references

GlyTouCan : G20966TZ


Composition

Hex:5 HexNAc:4


IUPAC

Man(a1-3)[Man(a1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)GlcNAc

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dglc-HEX-1:5
10s:n-acetyl
11b:a-dman-HEX-1:5
12b:a-dman-HEX-1:5
13b:a-dman-HEX-1:5
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:5o(4+1)9d
9:9d(2+1)10n
10:5o(6+1)11d
11:11o(3+1)12d
12:11o(6+1)13d


References (4)

Composition of the N-linked carbohydrates from ovalbumin and co-purified glycoproteins. (2000)
Harvey D, Wing D, Kuster B, Wilson I
Pubmed : 10833030   DOI : 10.1016/S1044-0305(00)00122-7
Status : Reviewed

1H NMR characterization of a hen ovalbumin tyrosinamide N-linked oligosaccharide library. (1995)
Corradi Da Silva M, Stubbs H, Tamura T, Rice K
Pubmed : 7733678  
Status : Reviewed

Resolution of some glycopeptides of hen ovalbumin by reverse-phase high-pressure liquid chromatography. (1984)
Dua V, Bush C
Pubmed : 6731806  
Status : Reviewed

The carbohydrate units of ovalbumin: complete structures of three glycopeptides (1978)
Conchie J, Strachan I
DOI : 10.1016/S0008-6215(00)80944-1
Status : Reviewed

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