Post-natal developmental changes in the composition of the rat neocortical N-glycome (2021)
Klarić TS, Salopek M, Micek V, Gornik Kljaić O, Lauc G
Glycobiology, 2021 vol.31(5):636-648
SNFG,
Text,
Oxford
taxonomy (1)
protein (0)
source (1)
structure (48)
composition (41)
disease (0)
reference (1)
site (0)
peptide (0)
- Rattus norvegicus (Norway rat)
Taxonomy
Protein
- neocortex (UBERON:0001950)
Source
- N-Linked / Complex / GlcNAc(b1-2)Man(a1-3)[Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)Man(a1-6)[GlcNAc(b1-4)][Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)Man(a1-6)[GlcNAc(b1-4)][Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Gal(b1-4)GlcNAc(b1-2)Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 11920
- N-Linked / Complex / Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-2)Man(a1-6)[GlcNAc(b1-4)][Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 11835
- N-Linked / Complex / Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Gal(b1-4)GlcNAc(b1-2)Man(a1-6)[GlcNAc(b1-2)Man(a1-3)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 10944
- N-Linked / Complex / Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-2)Man(a1-6)[GlcNAc(b1-2)Man(a1-3)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 11674
- N-Linked / Complex / Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-2)Man(a1-6)[Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 11665
- N-Linked / Complex / Structure 11660
- N-Linked / Complex / Structure 11904
- N-Linked / Complex / Structure 11966
- N-Linked / Complex / Structure 11540
- N-Linked / Complex / Structure 11969
- N-Linked / Complex / Structure 11551
- N-Linked / Complex / Structure 11710
- N-Linked / Complex / Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-2)[Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-6)]Man(a1-6)[Fuc(a1-3)[Gal(b1-4)]GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 11783
- N-Linked / Complex / Structure 11859
- N-Linked / Complex / Structure 11852
- N-Linked / Complex / Structure 11520
- N-Linked / Complex / Structure 11913
- N-Linked / Complex / Structure 11925
- N-Linked / Complex / Structure 11756
- N-Linked / Complex / Structure 11675
- N-Linked / Complex / Structure 11697
- N-Linked / Complex / Structure 11762
- N-Linked / Complex / NeuAc(a2-?)Gal(b1-4)GlcNAc(b1-2)[NeuAc(a2-?)Gal(b1-4)GlcNAc(b1-4)]Man(a1-3)[NeuAc(a2-?)Gal(b1-4)GlcNAc(b1-2)[NeuAc(a2-?)Gal(b1-4)GlcNAc(b1-6)]Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / High-Mannose / Man(a1-?)Man(a1-6)[Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / High-Mannose / Man(a1-?)Man(a1-6)[Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / High-Mannose / Man(a1-3)[Man(a1-6)]Man(a1-6)[Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / High-Mannose / Man(a1-3)[Man(a1-6)]Man(a1-6)[Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc+"+ Man(a1-2)"
- N-Linked / High-Mannose / Man(a1-2)Man(a1-3)[Man(a1-2)Man(a1-6)]Man(a1-6)[Man(a1-2)Man(a1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Hybrid / Structure 11149
- N-Linked / Hybrid / Structure 11778
- N-Linked / Pauci-Mannose / Man(a1-3)[Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Undefined core / Structure 9886
- N-Linked / Undefined core / Structure 9631
Reported structure
- Hex:3 HexNAc:2 dHex:1 (avg mass : 1056.9755 )
- Hex:3 HexNAc:3 dHex:1 (avg mass : 1260.1705 )
- Hex:3 HexNAc:4 (avg mass : 1317.2225 )
- Hex:3 HexNAc:4 dHex:1 (avg mass : 1463.3655 )
- Hex:3 HexNAc:5 dHex:1 (avg mass : 1666.5605 )
- Hex:4 HexNAc:2 (avg mass : 1072.9749 )
- Hex:4 HexNAc:2 dHex:1 (avg mass : 1219.1179 )
- Hex:4 HexNAc:4 dHex:1 (avg mass : 1625.5079 )
- Hex:4 HexNAc:4 dHex:2 (avg mass : 1771.6509 )
- Hex:4 HexNAc:5 dHex:1 (avg mass : 1828.7029 )
- Hex:4 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 2119.9608 )
- Hex:4 HexNAc:5 dHex:2 (avg mass : 1974.8459 )
- Hex:4 HexNAc:6 dHex:2 (avg mass : 2178.0409 )
- Hex:5 HexNAc:2 (avg mass : 1235.1173 )
- Hex:5 HexNAc:4 (avg mass : 1641.5073 )
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:3 (avg mass : 2661.424 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:4 (avg mass : 2952.6819 )
- Hex:5 HexNAc:4 dHex:2 (avg mass : 1933.7933 )
- Hex:5 HexNAc:4 dHex:2 NeuAc:1 (avg mass : 2225.0512 )
- Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 )
- Hex:5 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2573.3611 )
- Hex:5 HexNAc:5 dHex:2 (avg mass : 2136.9883 )
- Hex:5 HexNAc:5 dHex:2 NeuAc:1 (avg mass : 2428.2462 )
- Hex:5 HexNAc:5 dHex:3 (avg mass : 2283.1313 )
- Hex:5 HexNAc:6 dHex:2 NeuAc:1 (avg mass : 2631.4412 )
- Hex:6 HexNAc:2 (avg mass : 1397.2597 )
- Hex:6 HexNAc:4 dHex:2 (avg mass : 2095.9357 )
- Hex:6 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2735.5035 )
- Hex:6 HexNAc:5 dHex:2 NeuAc:1 (avg mass : 2590.3886 )
- Hex:6 HexNAc:5 dHex:2 NeuAc:2 (avg mass : 2881.6465 )
- Hex:6 HexNAc:5 dHex:4 (avg mass : 2591.4167 )
- Hex:6 HexNAc:6 dHex:1 NeuAc:3 (avg mass : 3229.9564 )
- Hex:6 HexNAc:6 dHex:3 NeuAc:1 (avg mass : 2939.7266 )
- Hex:7 HexNAc:2 (avg mass : 1559.4021 )
- Hex:7 HexNAc:6 dHex:1 NeuAc:3 (avg mass : 3392.0988 )
- Hex:7 HexNAc:6 dHex:1 NeuAc:4 (avg mass : 3683.3567 )
- Hex:7 HexNAc:6 dHex:2 NeuAc:3 (avg mass : 3538.2418 )
- Hex:7 HexNAc:6 dHex:4 NeuAc:1 (avg mass : 3248.012 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:9 HexNAc:2 (avg mass : 1883.6869 )
Composition
Disease
Reported glycosite
Mass spectrometry observed peptide
-
- N-Linked / Complex
(avg mass : 1260.1705)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1317.2225)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1463.3655)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1463.3655)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1625.5079)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1625.5079)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1625.5079)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1641.5073)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1666.5605)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1666.5605)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1771.6509)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1771.6509)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1828.7029)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1828.7029)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1933.7933)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1974.8459)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 1974.8459)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2079.9363)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2119.9608)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2136.9883)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2178.0409)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2225.0512)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2283.1313)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2428.2462)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2573.3611)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2590.3886)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2591.4167)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2631.4412)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2661.424)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2735.5035)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2881.6465)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2939.7266)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 2952.6819)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 3229.9564)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 3248.012)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 3392.0988)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 3538.2418)
- neocortex (UBERON:0001950)
-
- N-Linked / Complex
(avg mass : 3683.3567)
- neocortex (UBERON:0001950)
-
- N-Linked / High-Mannose
(avg mass : 1072.9749)
- neocortex (UBERON:0001950)
-
- N-Linked / High-Mannose
(avg mass : 1219.1179)
- neocortex (UBERON:0001950)
-
- N-Linked / High-Mannose
(avg mass : 1235.1173)
- neocortex (UBERON:0001950)
-
- N-Linked / High-Mannose
(avg mass : 1397.2597)
- neocortex (UBERON:0001950)
-
- N-Linked / High-Mannose
(avg mass : 1883.6869)
- neocortex (UBERON:0001950)
-
- N-Linked / Hybrid
(avg mass : 1787.6503)
- neocortex (UBERON:0001950)
-
- N-Linked / Hybrid
(avg mass : 2095.9357)
- neocortex (UBERON:0001950)
-
- N-Linked / Pauci-Mannose
(avg mass : 1056.9755)
- neocortex (UBERON:0001950)
-
- N-Linked / Undefined core
(avg mass : 1559.4021)
- neocortex (UBERON:0001950)
-
- N-Linked / Undefined core
(avg mass : 1721.5445)
- N-Linked / Undefined core
(avg mass : 1721.5445)
Source
Reported glycosite
- N-Linked / Undefined core
(avg mass : 1559.4021)
Source
Reported glycosite
- N-Linked / Pauci-Mannose
(avg mass : 1056.9755)
Source
Reported glycosite
- N-Linked / Hybrid
(avg mass : 2095.9357)
Source
Reported glycosite
- N-Linked / Hybrid
(avg mass : 1787.6503)
Source
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1883.6869)
Source
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1397.2597)
Source
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1235.1173)
Source
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1219.1179)
Source
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1072.9749)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 3683.3567)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 3538.2418)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 3392.0988)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 3248.012)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 3229.9564)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2952.6819)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2939.7266)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2881.6465)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2735.5035)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2661.424)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2631.4412)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2591.4167)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2590.3886)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2573.3611)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2428.2462)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2283.1313)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2225.0512)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2178.0409)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2136.9883)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2119.9608)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2079.9363)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1974.8459)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1974.8459)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1933.7933)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1828.7029)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1828.7029)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1771.6509)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1771.6509)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1666.5605)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1666.5605)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1641.5073)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1625.5079)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1625.5079)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1625.5079)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1463.3655)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1463.3655)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1317.2225)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 1260.1705)
