Glycomic analysis of high density lipoprotein shows a highly sialylated particle (2014)
Huang J1, Lee H, Zivkovic AM, Smilowitz JT, Rivera N, German JB, Lebrilla CB
J Proteome Res, 2014 vol.13(2):681-91
SNFG,
Text,
Oxford
- Homo sapiens (Human)
Taxonomy
- Hemopexin / Homo sapiens P02790
- Alpha-2-hs-glycoprotein / Homo sapiens P02765
- Apolipoprotein C-III / Homo sapiens P02656
- Angiotensinogen / Homo sapiens P01019
- Kininogen-1 / Homo sapiens P01042
- Beta-2-glycoprotein 1 / Homo sapiens P02749
- Alpha-1b-glycoprotein / Homo sapiens P04217
- Alpha-1-antitrypsin / Homo sapiens P01009
- Serotransferrin / Homo sapiens P02787
Protein
- Blood Plasma (UBERON_0001969)
Source
- N-Linked / Complex / Structure 3507
- O-Linked / Core 1 / Neu5Ac(?2-?)Gal(b1-3)[Neu5Ac(?2-?)]GalNAc(a1-
- N-Linked / Complex / NeuAc(?2-?)Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[NeuAc(?2-?)Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- O-Linked / Core 1 / Gal(b1-3)[Neu5Ac(?2-?)]GalNAc(a1-
- N-Linked / Complex / Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 2719
Reported structure
- Hex:1 HexNAc:1 NeuAc:2 (avg mass : 965.8685 )
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:5 HexNAc:4 NeuAc:1 (avg mass : 1932.7652 )
- Hex:5 HexNAc:4 NeuAc:2 (avg mass : 2224.0231 )
- Hex:1 HexNAc:1 NeuAc:1 (avg mass : 674.6106 )
- Hex:4 HexNAc:4 dHex:1 (avg mass : 1625.5079 )
Composition
- Esophageal cancer (DOID:5041)
Disease
- Apolipoprotein C-III / Homo sapiens :
-
Hemopexin / Homo sapiens :
- Undefined site
-
Kininogen-1 / Homo sapiens :
- Undefined site
-
Serotransferrin / Homo sapiens :
- Undefined site
-
Alpha-1-antitrypsin / Homo sapiens :
- Undefined site
- Alpha-1b-glycoprotein / Homo sapiens :
- Alpha-2-hs-glycoprotein / Homo sapiens :
-
Beta-2-glycoprotein 1 / Homo sapiens :
- Undefined site
- Angiotensinogen / Homo sapiens :
Reported glycosite
Mass spectrometry validated peptide
-
- N-Linked / Complex (avg mass : 1625.5079 )
- Angiotensinogen / Homo sapiens :
-
- N-Linked / Complex (avg mass : 2224.0231 )
- Alpha-2-hs-glycoprotein / Homo sapiens :
- Angiotensinogen / Homo sapiens :
-
- N-Linked / Complex (avg mass : 1932.7652 )
- Alpha-1b-glycoprotein / Homo sapiens :
- Angiotensinogen / Homo sapiens :
-
- O-Linked / Core 1 (avg mass : 674.6106 )
- Alpha-2-hs-glycoprotein / Homo sapiens :
-
- N-Linked / Complex (avg mass : 1787.6503 )
- Angiotensinogen / Homo sapiens :
-
- O-Linked / Core 1 (avg mass : 965.8685 )
- Apolipoprotein C-III / Homo sapiens :
- Alpha-2-hs-glycoprotein / Homo sapiens :
-
- Hex:4 HexNAc:4 dHex:1 (avg mass : 1625.5079 )
-
Hemopexin / Homo sapiens :
- Undefined site
-
- Hex:1 HexNAc:1 NeuAc:1 (avg mass : 674.6106 )
-
Hemopexin / Homo sapiens :
- Undefined site
-
Kininogen-1 / Homo sapiens :
- Undefined site
-
- Hex:5 HexNAc:4 NeuAc:2 (avg mass : 2224.0231 )
- N-Linked / Complex / NeuAc(?2-?)Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[NeuAc(?2-?)Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
-
Hemopexin / Homo sapiens :
- Undefined site
-
Kininogen-1 / Homo sapiens :
- Undefined site
-
Serotransferrin / Homo sapiens :
- Undefined site
-
Alpha-1-antitrypsin / Homo sapiens :
- Undefined site
-
Beta-2-glycoprotein 1 / Homo sapiens :
- Undefined site
-
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- N-Linked / Complex / Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
-
Alpha-1-antitrypsin / Homo sapiens :
- Undefined site
Suggested structure
Reported glycosite
Suggested structure
Reported glycosite
Suggested structure
Reported glycosite
Suggested structure
Reported glycosite
Reported glycosite
Reported glycosite
Reported glycosite
Reported glycosite
Reported glycosite
Reported glycosite
