Enrichment of glycopeptides for glycan structure and attachment site identification (2009)
Nilsson J, Rüetschi U, Halim A, Hesse C, Carlsohn E, Brinkmalm G, Larson G.
Nat Methods, 2009 vol.6(11):809-11
SNFG,
Text,
Oxford
Taxonomy (1)
Protein (31)
Tissue (1)
Structure (8)
Composition (9)
Disease (0)
Site (45)
Peptide (0)
- Homo sapiens (Human)
Taxonomy
- Insulin-like growth factor-binding protein 6 / Homo sapiens P24592
- Haptoglobin / Homo sapiens P00738
- Leucine-rich alpha-2-glycoprotein / Homo sapiens P02750
- Alpha-1b-glycoprotein / Homo sapiens P04217
- Alpha-1-antitrypsin / Homo sapiens P01009
- Antithrombin-III / Homo sapiens P01008
- Ceruloplasmin / Homo sapiens P00450
- Afamin / Homo sapiens P43652
- Plasma protease c1 inhibitor / Homo sapiens P05155
- Ig alpha-1 chain c region / Homo sapiens P01876
- Hemopexin / Homo sapiens P02790
- Complement factor i / Homo sapiens P05156
- Prosaas / Homo sapiens Q9UHG2
- Amyloid-like protein 1 / Homo sapiens P51693
- Complement factor h / Homo sapiens P08603
- Prostaglandin-h2 d-isomerase / Homo sapiens P41222
- Fractalkine / Homo sapiens P78423
- Apolipoprotein C-III / Homo sapiens P02656
- Serotransferrin / Homo sapiens P02787
- Thyroxine-binding globulin / Homo sapiens P05543
- Kininogen-1 / Homo sapiens P01042
- Alpha-2-hs-glycoprotein / Homo sapiens P02765
- Alpha-1-acid glycoprotein 2 / Homo sapiens P19652
- Monocyte differentiation antigen cd14 / Homo sapiens P08571
- Insulin-like growth factor II / Homo sapiens P01344
- Apolipoprotein e / Homo sapiens P02649
- Beta-2-glycoprotein 1 / Homo sapiens P02749
- Mimecan / Homo sapiens P20774
- Prothrombin / Homo sapiens P00734
- Apolipoprotein d / Homo sapiens P05090
- Clusterin / Homo sapiens P10909
Protein
- N-Linked / Complex / Structure 1586
- N-Linked / Complex / Structure 3041
- N-Linked / Complex / Structure 3534
- N-Linked / Complex / Structure 720
- N-Linked / Complex / Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Structure 2011
- N-Linked / Complex / Structure 644
- N-Linked / Complex / Structure 2369
Reported structure
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:4 HexNAc:4 (avg mass : 1479.3649 )
- Hex:5 HexNAc:5 (avg mass : 1844.7023 )
- Hex:6 HexNAc:5 (avg mass : 2006.8447 )
- Hex:5 HexNAc:4 (avg mass : 1641.5073 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
- Hex:6 HexNAc:5 dHex:1 (avg mass : 2152.9877 )
- Hex:1 HexNAc:1 (avg mass : 383.3527 )
- Hex:5 HexNAc:5 dHex:1 (avg mass : 1990.8453 )
Composition
Disease
- Thyroxine-binding globulin / Homo sapiens :
- Amyloid-like protein 1 / Homo sapiens :
- Undefined site
- Kininogen-1 / Homo sapiens :
- Insulin-like growth factor II / Homo sapiens :
- Undefined site
- Afamin / Homo sapiens :
- Leucine-rich alpha-2-glycoprotein / Homo sapiens :
- Apolipoprotein e / Homo sapiens :
- Undefined site
- Complement factor h / Homo sapiens :
- Serotransferrin / Homo sapiens :
- Clusterin / Homo sapiens :
- Haptoglobin / Homo sapiens :
- Hemopexin / Homo sapiens :
- Undefined site
- Asn-64 (4 structures)
- Asn-187 (4 structures)
- Asn-453 (2 structures)
- Ceruloplasmin / Homo sapiens :
- Antithrombin-III / Homo sapiens :
- Insulin-like growth factor-binding protein 6 / Homo sapiens :
- Undefined site
- Complement factor i / Homo sapiens :
- Alpha-1-acid glycoprotein 2 / Homo sapiens :
- Beta-2-glycoprotein 1 / Homo sapiens :
- Prothrombin / Homo sapiens :
- Alpha-2-hs-glycoprotein / Homo sapiens :
- Monocyte differentiation antigen cd14 / Homo sapiens :
- Undefined site
- Prostaglandin-h2 d-isomerase / Homo sapiens :
- Apolipoprotein C-III / Homo sapiens :
- Undefined site
- Apolipoprotein d / Homo sapiens :
- Mimecan / Homo sapiens :
- Undefined site
- Plasma protease c1 inhibitor / Homo sapiens :
- Alpha-1-antitrypsin / Homo sapiens :
- Prosaas / Homo sapiens :
- Undefined site
- Ig alpha-1 chain c region / Homo sapiens :
- Fractalkine / Homo sapiens :
- Undefined site
- Alpha-1b-glycoprotein / Homo sapiens :
Reported glycosite
Mass spectrometry validated peptide
-
- N-Linked / Complex (avg mass : 2152.9877 )
-
- N-Linked / Complex (avg mass : 2006.8447 )
- Serotransferrin / Homo sapiens :
- Alpha-2-hs-glycoprotein / Homo sapiens :
- Afamin / Homo sapiens :
- Alpha-1-acid glycoprotein 2 / Homo sapiens :
- Beta-2-glycoprotein 1 / Homo sapiens :
- Leucine-rich alpha-2-glycoprotein / Homo sapiens :
- Hemopexin / Homo sapiens :
- Alpha-1b-glycoprotein / Homo sapiens :
- Alpha-1-antitrypsin / Homo sapiens :
- Prostaglandin-h2 d-isomerase / Homo sapiens :
- Kininogen-1 / Homo sapiens :
Reported glycosite
-
- N-Linked / Complex (avg mass : 1641.5073 )
- Thyroxine-binding globulin / Homo sapiens :
- Alpha-2-hs-glycoprotein / Homo sapiens :
- Prothrombin / Homo sapiens :
- Ig alpha-1 chain c region / Homo sapiens :
- Leucine-rich alpha-2-glycoprotein / Homo sapiens :
- Afamin / Homo sapiens :
- Clusterin / Homo sapiens :
- Complement factor h / Homo sapiens :
- Alpha-1-acid glycoprotein 2 / Homo sapiens :
- Plasma protease c1 inhibitor / Homo sapiens :
- Alpha-1-antitrypsin / Homo sapiens :
- Beta-2-glycoprotein 1 / Homo sapiens :
- Apolipoprotein d / Homo sapiens :
- Haptoglobin / Homo sapiens :
- Hemopexin / Homo sapiens :
- Antithrombin-III / Homo sapiens :
- Alpha-1b-glycoprotein / Homo sapiens :
- Serotransferrin / Homo sapiens :
- Prostaglandin-h2 d-isomerase / Homo sapiens :
- Complement factor i / Homo sapiens :
- Ceruloplasmin / Homo sapiens :
Reported glycosite
-
- N-Linked / Complex (avg mass : 1990.8453 )
-
- N-Linked / Complex (avg mass : 1479.3649 )
-
- N-Linked / Complex (avg mass : 1844.7023 )
-
- N-Linked / Complex (avg mass : 2372.1821 )
- Alpha-1-acid glycoprotein 2 / Homo sapiens :
Reported glycosite
-
- N-Linked / Complex (avg mass : 1787.6503 )
- Clusterin / Homo sapiens :
- Afamin / Homo sapiens :
- Prostaglandin-h2 d-isomerase / Homo sapiens :
- Alpha-1-antitrypsin / Homo sapiens :
- Alpha-2-hs-glycoprotein / Homo sapiens :
- Beta-2-glycoprotein 1 / Homo sapiens :
- Apolipoprotein d / Homo sapiens :
- Hemopexin / Homo sapiens :
- Ceruloplasmin / Homo sapiens :
- Serotransferrin / Homo sapiens :
Reported glycosite
-
- Hex:1 HexNAc:1 (avg mass : 383.3527 )
- Hemopexin / Homo sapiens :
- Undefined site
- Mimecan / Homo sapiens :
- Undefined site
- Apolipoprotein e / Homo sapiens :
- Undefined site
- Amyloid-like protein 1 / Homo sapiens :
- Undefined site
- Prosaas / Homo sapiens :
- Undefined site
- Monocyte differentiation antigen cd14 / Homo sapiens :
- Undefined site
- Fractalkine / Homo sapiens :
- Undefined site
- Apolipoprotein C-III / Homo sapiens :
- Undefined site
- Insulin-like growth factor II / Homo sapiens :
- Undefined site
- Insulin-like growth factor-binding protein 6 / Homo sapiens :
- Undefined site
Suggested structure
Reported glycosite
