Enrichment of glycopeptides for glycan structure and attachment site identification (2009)
Nilsson J, Rüetschi U, Halim A, Hesse C, Carlsohn E, Brinkmalm G, Larson G.
Nat Methods, 2009 vol.6(11):809-11
SNFG,
Text,
Oxford
taxonomy (1)
protein (32)
source (1)
structure (8)
composition (9)
disease (0)
reference (1)
site (47)
peptide (0)
- Homo sapiens (Human)
Taxonomy
- Afamin / Homo sapiens P43652
- Alpha-1-acid glycoprotein 1 / Homo sapiens P02763
- Alpha-1-acid glycoprotein 2 / Homo sapiens P19652
- Alpha-1-antitrypsin / Homo sapiens P01009
- Alpha-1b-glycoprotein / Homo sapiens P04217
- Alpha-2-hs-glycoprotein / Homo sapiens P02765
- Amyloid-like protein 1 / Homo sapiens P51693
- Antithrombin-III / Homo sapiens P01008
- Apolipoprotein C-III / Homo sapiens P02656
- Apolipoprotein d / Homo sapiens P05090
- Apolipoprotein e / Homo sapiens P02649
- Beta-2-glycoprotein 1 / Homo sapiens P02749
- Ceruloplasmin / Homo sapiens P00450
- Clusterin / Homo sapiens P10909
- Complement factor h / Homo sapiens P08603
- Complement factor i / Homo sapiens P05156
- Fractalkine / Homo sapiens P78423
- Haptoglobin / Homo sapiens P00738
- Hemopexin / Homo sapiens P02790
- Immunoglobulin heavy constant alpha 1 / Homo sapiens P01876
- Insulin-like growth factor II / Homo sapiens P01344
- Insulin-like growth factor-binding protein 6 / Homo sapiens P24592
- Kininogen-1 / Homo sapiens P01042
- Leucine-rich alpha-2-glycoprotein / Homo sapiens P02750
- Mimecan / Homo sapiens P20774
- Monocyte differentiation antigen cd14 / Homo sapiens P08571
- Plasma protease c1 inhibitor / Homo sapiens P05155
- Prosaas / Homo sapiens Q9UHG2
- Prostaglandin-h2 d-isomerase / Homo sapiens P41222
- Prothrombin / Homo sapiens P00734
- Serotransferrin / Homo sapiens P02787
- Thyroxine-binding globulin / Homo sapiens P05543
Protein
- N-Linked / Complex / Structure 2011
- N-Linked / Complex / Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Structure 3041
- N-Linked / Complex / Structure 1586
- N-Linked / Complex / Structure 2369
- N-Linked / Complex / Structure 644
- N-Linked / Complex / Structure 3534
- N-Linked / Complex / Structure 720
Reported structure
- Hex:1 HexNAc:1 (avg mass : 383.3527 )
- Hex:4 HexNAc:4 (avg mass : 1479.3649 )
- Hex:5 HexNAc:4 (avg mass : 1641.5073 )
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:5 HexNAc:5 (avg mass : 1844.7023 )
- Hex:5 HexNAc:5 dHex:1 (avg mass : 1990.8453 )
- Hex:6 HexNAc:5 (avg mass : 2006.8447 )
- Hex:6 HexNAc:5 dHex:1 (avg mass : 2152.9877 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
Composition
Disease
- Afamin / Homo sapiens
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-1b-glycoprotein / Homo sapiens
- Alpha-2-hs-glycoprotein / Homo sapiens
- Amyloid-like protein 1 / Homo sapiens
- Antithrombin-III / Homo sapiens
- Apolipoprotein C-III / Homo sapiens
- Apolipoprotein d / Homo sapiens
- Apolipoprotein e / Homo sapiens
- Beta-2-glycoprotein 1 / Homo sapiens
- Ceruloplasmin / Homo sapiens
- Clusterin / Homo sapiens
- Complement factor h / Homo sapiens
- Complement factor i / Homo sapiens
- Fractalkine / Homo sapiens
- Haptoglobin / Homo sapiens
- Hemopexin / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Insulin-like growth factor II / Homo sapiens
- Insulin-like growth factor-binding protein 6 / Homo sapiens
- Kininogen-1 / Homo sapiens
- Leucine-rich alpha-2-glycoprotein / Homo sapiens
- Mimecan / Homo sapiens
- Monocyte differentiation antigen cd14 / Homo sapiens
- Plasma protease c1 inhibitor / Homo sapiens
- Prosaas / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Prothrombin / Homo sapiens
- Serotransferrin / Homo sapiens
- Thyroxine-binding globulin / Homo sapiens
Reported glycosite
Mass spectrometry observed peptide
-
- N-Linked / Complex (avg mass : 1479.3649)
- Afamin / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Beta-2-glycoprotein 1 / Homo sapiens
- Hemopexin / Homo sapiens
- Leucine-rich alpha-2-glycoprotein / Homo sapiens
- Serotransferrin / Homo sapiens
-
- N-Linked / Complex (avg mass : 1641.5073)
- Afamin / Homo sapiens
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-1b-glycoprotein / Homo sapiens
- Alpha-2-hs-glycoprotein / Homo sapiens
- Antithrombin-III / Homo sapiens
- Apolipoprotein d / Homo sapiens
- Beta-2-glycoprotein 1 / Homo sapiens
- Ceruloplasmin / Homo sapiens
- Clusterin / Homo sapiens
- Complement factor h / Homo sapiens
- Complement factor i / Homo sapiens
- Haptoglobin / Homo sapiens
- Hemopexin / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Leucine-rich alpha-2-glycoprotein / Homo sapiens
- Plasma protease c1 inhibitor / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Prothrombin / Homo sapiens
- Serotransferrin / Homo sapiens
- Thyroxine-binding globulin / Homo sapiens
-
- N-Linked / Complex (avg mass : 1787.6503)
- Afamin / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-2-hs-glycoprotein / Homo sapiens
- Apolipoprotein d / Homo sapiens
- Beta-2-glycoprotein 1 / Homo sapiens
- Ceruloplasmin / Homo sapiens
- Clusterin / Homo sapiens
- Hemopexin / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Serotransferrin / Homo sapiens
-
- N-Linked / Complex (avg mass : 1844.7023)
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
-
- N-Linked / Complex (avg mass : 1990.8453)
- Prostaglandin-h2 d-isomerase / Homo sapiens
-
- N-Linked / Complex (avg mass : 2006.8447)
- Afamin / Homo sapiens
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-1b-glycoprotein / Homo sapiens
- Alpha-2-hs-glycoprotein / Homo sapiens
- Beta-2-glycoprotein 1 / Homo sapiens
- Hemopexin / Homo sapiens
- Kininogen-1 / Homo sapiens
- Leucine-rich alpha-2-glycoprotein / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Serotransferrin / Homo sapiens
-
- N-Linked / Complex (avg mass : 2152.9877)
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Beta-2-glycoprotein 1 / Homo sapiens
- Clusterin / Homo sapiens
- Hemopexin / Homo sapiens
- Kininogen-1 / Homo sapiens
- Leucine-rich alpha-2-glycoprotein / Homo sapiens
-
- N-Linked / Complex (avg mass : 2372.1821)
- Alpha-1-acid glycoprotein 1 / Homo sapiens
-
- Hex:1 HexNAc:1 / O-Linked (avg mass : 383.3527)
- Amyloid-like protein 1 / Homo sapiens
- Apolipoprotein C-III / Homo sapiens
- Apolipoprotein e / Homo sapiens
- Fractalkine / Homo sapiens
- Hemopexin / Homo sapiens
- Insulin-like growth factor II / Homo sapiens
- Insulin-like growth factor-binding protein 6 / Homo sapiens
- Mimecan / Homo sapiens
- Monocyte differentiation antigen cd14 / Homo sapiens
- Prosaas / Homo sapiens
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Disease
Reported glycosite
Disease
Reported glycosite
Disease
Reported glycosite
Disease
Reported glycosite
Disease
Reported glycosite
Disease
Reported glycosite
Disease
Reported glycosite
Disease
Reported glycosite
