Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD (2012)
Halim A, Nilsson J, Rüetschi U, Hesse C, Larson G
Mol Cell Proteomics, 2012 vol.11(4):M111.013649
SNFG,
Text,
Oxford
taxonomy (1)
protein (42)
source (1)
structure (0)
composition (11)
disease (0)
reference (1)
site (58)
peptide (0)
- Homo sapiens (Human)
Taxonomy
- Alpha-1-acid glycoprotein 1 / Homo sapiens P02763
- Alpha-1-acid glycoprotein 2 / Homo sapiens P19652
- Alpha-1-antitrypsin / Homo sapiens P01009
- Alpha-2-HS-glycoprotein / Homo sapiens P02765
- Apolipoprotein C-III / Homo sapiens P02656
- Apolipoprotein d / Homo sapiens P05090
- Apolipoprotein f / Homo sapiens Q13790
- Basement membrane-specific heparan sulfate proteoglycan core protein / Homo sapiens P98160
- Carboxypeptidase b2 / Homo sapiens Q96IY4
- CD27 antigen / Homo sapiens P26842
- Collagen alpha-1(xv) chain / Homo sapiens P39059
- Complement component c7 / Homo sapiens P10643
- Cyclic amp-responsive element-binding protein 3-like protein 3 / Homo sapiens Q68CJ9
- Ecto-adp-ribosyltransferase 3 / Homo sapiens Q13508
- Fractalkine / Homo sapiens P78423
- Glycophorin a, b and c / Homo sapiens P06028 P02724 P04921
- Hepatitis a virus cellular receptor 2 / Homo sapiens Q8TDQ0
- HLA class II histocompatibility antigen gamma chain / Homo sapiens P04233
- Immunoglobulin heavy constant alpha 1 / Homo sapiens P01876
- Insulin-like growth factor II / Homo sapiens P01344
- Interleukin-18-binding protein / Homo sapiens O95998
- Microfibrillar-associated protein 5 / Homo sapiens Q13361
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens Q96FE7
- Plasma protease c1 inhibitor / Homo sapiens P05155
- Plasma serine protease inhibitor / Homo sapiens P05154
- Poliovirus receptor / Homo sapiens P15151
- Proheparin-binding EGF-like growth factor / Homo sapiens Q99075
- Prosaas / Homo sapiens Q9UHG2
- Prostaglandin-h2 d-isomerase / Homo sapiens P41222
- Protein AMBP / Homo sapiens P02760
- Protein delta homolog 1 / Homo sapiens P80370
- Protein heg homolog 1 / Homo sapiens Q9ULI3
- Protein yipf3 / Homo sapiens Q9GZM5
- Prothrombin / Homo sapiens P00734
- Receptor-type tyrosine-protein phosphatase-like n / Homo sapiens Q16849
- Syndecan-2 / Homo sapiens P34741
- Transmembrane protein C16orf54 / Homo sapiens Q6UWD8
- Tumor necrosis factor receptor superfamily member 6 / Homo sapiens P25445
- Uromodulin / Homo sapiens P07911
- Vasorin / Homo sapiens Q6EMK4
- Vitamin k-dependent protein c / Homo sapiens P04070
- Zinc-alpha-2-glycoprotein / Homo sapiens P25311
Protein
- Urine (UBERON_0001088)
Source
Reported structure
- HexNAc:1 (avg mass : 221.2103 )
- Hex:1 HexNAc:1 (avg mass : 383.3527 )
- Hex:1 HexNAc:1 Su:1 (avg mass : 463.4169 )
- Hex:1 HexNAc:2 (avg mass : 586.5477 )
- Hex:2 HexNAc:2 (avg mass : 748.6901 )
- Hex:2 HexNAc:2 dHex:1 (avg mass : 894.8331 )
- Hex:5 HexNAc:4 (avg mass : 1641.5073 )
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:6 HexNAc:5 (avg mass : 2006.8447 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
- Hex:7 HexNAc:6 dHex:1 (avg mass : 2518.3251 )
Composition
Disease
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-2-HS-glycoprotein / Homo sapiens
- Apolipoprotein C-III / Homo sapiens
- Apolipoprotein d / Homo sapiens
- Apolipoprotein f / Homo sapiens
- Basement membrane-specific heparan sulfate proteoglycan core protein / Homo sapiens
- Carboxypeptidase b2 / Homo sapiens
- CD27 antigen / Homo sapiens
- Collagen alpha-1(xv) chain / Homo sapiens
- Complement component c7 / Homo sapiens
- Cyclic amp-responsive element-binding protein 3-like protein 3 / Homo sapiens
- Ecto-adp-ribosyltransferase 3 / Homo sapiens
- Fractalkine / Homo sapiens
- Glycophorin a, b and c / Homo sapiens
- Hepatitis a virus cellular receptor 2 / Homo sapiens
- HLA class II histocompatibility antigen gamma chain / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Insulin-like growth factor II / Homo sapiens
- Interleukin-18-binding protein / Homo sapiens
- Microfibrillar-associated protein 5 / Homo sapiens
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens
- Plasma protease c1 inhibitor / Homo sapiens
- Plasma serine protease inhibitor / Homo sapiens
- Poliovirus receptor / Homo sapiens
- Proheparin-binding EGF-like growth factor / Homo sapiens
- Prosaas / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Protein AMBP / Homo sapiens
- Protein delta homolog 1 / Homo sapiens
- Protein heg homolog 1 / Homo sapiens
- Protein yipf3 / Homo sapiens
- Prothrombin / Homo sapiens
- Receptor-type tyrosine-protein phosphatase-like n / Homo sapiens
- Syndecan-2 / Homo sapiens
- Transmembrane protein C16orf54 / Homo sapiens
- Tumor necrosis factor receptor superfamily member 6 / Homo sapiens
- Uromodulin / Homo sapiens
- Vasorin / Homo sapiens
- Vitamin k-dependent protein c / Homo sapiens
- Zinc-alpha-2-glycoprotein / Homo sapiens
Reported glycosite
Mass spectrometry observed peptide
-
- HexNAc:1 / O-Linked (avg mass : 221.2103)
- Urine (UBERON_0001088)
- Microfibrillar-associated protein 5 / Homo sapiens
- Protein yipf3 / Homo sapiens
-
- Hex:1 HexNAc:1 / O-Linked (avg mass : 383.3527)
- Urine (UBERON_0001088)
- Alpha-2-HS-glycoprotein / Homo sapiens
- Apolipoprotein C-III / Homo sapiens
- Apolipoprotein f / Homo sapiens
- Basement membrane-specific heparan sulfate proteoglycan core protein / Homo sapiens
- CD27 antigen / Homo sapiens
- Collagen alpha-1(xv) chain / Homo sapiens
- Complement component c7 / Homo sapiens
- Cyclic amp-responsive element-binding protein 3-like protein 3 / Homo sapiens
- Ecto-adp-ribosyltransferase 3 / Homo sapiens
- Fractalkine / Homo sapiens
- Glycophorin a, b and c / Homo sapiens
- Hepatitis a virus cellular receptor 2 / Homo sapiens
- HLA class II histocompatibility antigen gamma chain / Homo sapiens
- Insulin-like growth factor II / Homo sapiens
- Interleukin-18-binding protein / Homo sapiens
- Microfibrillar-associated protein 5 / Homo sapiens
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens
- Plasma serine protease inhibitor / Homo sapiens
- Proheparin-binding EGF-like growth factor / Homo sapiens
- Prosaas / Homo sapiens
- Protein delta homolog 1 / Homo sapiens
- Protein heg homolog 1 / Homo sapiens
- Protein yipf3 / Homo sapiens
- Receptor-type tyrosine-protein phosphatase-like n / Homo sapiens
- Syndecan-2 / Homo sapiens
- Transmembrane protein C16orf54 / Homo sapiens
- Tumor necrosis factor receptor superfamily member 6 / Homo sapiens
- Vitamin k-dependent protein c / Homo sapiens
-
- Hex:1 HexNAc:1 Su:1 / O-Linked (avg mass : 463.4169)
- Urine (UBERON_0001088)
- Microfibrillar-associated protein 5 / Homo sapiens
-
- Hex:1 HexNAc:2 / O-Linked (avg mass : 586.5477)
- Urine (UBERON_0001088)
- Protein yipf3 / Homo sapiens
-
- Hex:2 HexNAc:2 / O-Linked (avg mass : 748.6901)
- Urine (UBERON_0001088)
- Interleukin-18-binding protein / Homo sapiens
- Protein yipf3 / Homo sapiens
-
- Hex:2 HexNAc:2 dHex:1 / O-Linked (avg mass : 894.8331)
- Urine (UBERON_0001088)
- Protein yipf3 / Homo sapiens
-
- Hex:5 HexNAc:4 / N-Linked (avg mass : 1641.5073)
- Urine (UBERON_0001088)
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-2-HS-glycoprotein / Homo sapiens
- Carboxypeptidase b2 / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Interleukin-18-binding protein / Homo sapiens
- Plasma protease c1 inhibitor / Homo sapiens
- Poliovirus receptor / Homo sapiens
- Protein AMBP / Homo sapiens
- Prothrombin / Homo sapiens
- Vasorin / Homo sapiens
- Zinc-alpha-2-glycoprotein / Homo sapiens
-
- Hex:5 HexNAc:4 dHex:1 / N-Linked (avg mass : 1787.6503)
- Urine (UBERON_0001088)
- Interleukin-18-binding protein / Homo sapiens
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
-
- Hex:6 HexNAc:5 / N-Linked (avg mass : 2006.8447)
- Urine (UBERON_0001088)
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Apolipoprotein d / Homo sapiens
- Uromodulin / Homo sapiens
-
- Hex:7 HexNAc:6 / N-Linked (avg mass : 2372.1821)
- Urine (UBERON_0001088)
- Uromodulin / Homo sapiens
-
- Hex:7 HexNAc:6 dHex:1 / N-Linked (avg mass : 2518.3251)
- Urine (UBERON_0001088)
- Apolipoprotein d / Homo sapiens
- Uromodulin / Homo sapiens
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
