Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD (2012)
Halim A, Nilsson J, Rüetschi U, Hesse C, Larson G
Mol Cell Proteomics, 2012 vol.11(4):M111.013649
SNFG,
Text,
Oxford
taxonomy (1)
protein (42)
source (1)
structure (0)
composition (11)
disease (0)
reference (1)
site (58)
peptide (0)
- Homo sapiens (Human)
Taxonomy
- Alpha-1-acid glycoprotein 1 / Homo sapiens P02763
- Alpha-1-acid glycoprotein 2 / Homo sapiens P19652
- Alpha-1-antitrypsin / Homo sapiens P01009
- Alpha-2-HS-glycoprotein / Homo sapiens P02765
- Apolipoprotein C-III / Homo sapiens P02656
- Apolipoprotein D / Homo sapiens P05090
- Apolipoprotein F / Homo sapiens Q13790
- Basement membrane-specific heparan sulfate proteoglycan core protein / Homo sapiens P98160
- Carboxypeptidase b2 / Homo sapiens Q96IY4
- CD27 antigen / Homo sapiens P26842
- Collagen alpha-1(xv) chain / Homo sapiens P39059
- Complement component c7 / Homo sapiens P10643
- Cyclic amp-responsive element-binding protein 3-like protein 3 / Homo sapiens Q68CJ9
- Ecto-adp-ribosyltransferase 3 / Homo sapiens Q13508
- Fractalkine / Homo sapiens P78423
- Glycophorin a, b and c / Homo sapiens P06028 P04921 P02724
- Hepatitis a virus cellular receptor 2 / Homo sapiens Q8TDQ0
- HLA class II histocompatibility antigen gamma chain / Homo sapiens P04233
- Immunoglobulin heavy constant alpha 1 / Homo sapiens P01876
- Insulin-like growth factor II / Homo sapiens P01344
- Interleukin-18-binding protein / Homo sapiens O95998
- Microfibrillar-associated protein 5 / Homo sapiens Q13361
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens Q96FE7
- Plasma protease c1 inhibitor / Homo sapiens P05155
- Plasma serine protease inhibitor / Homo sapiens P05154
- Poliovirus receptor / Homo sapiens P15151
- Proheparin-binding EGF-like growth factor / Homo sapiens Q99075
- Prosaas / Homo sapiens Q9UHG2
- Prostaglandin-h2 d-isomerase / Homo sapiens P41222
- Protein AMBP / Homo sapiens P02760
- Protein delta homolog 1 / Homo sapiens P80370
- Protein heg homolog 1 / Homo sapiens Q9ULI3
- Protein YIPF3 / Homo sapiens Q9GZM5
- Prothrombin / Homo sapiens P00734
- Receptor-type tyrosine-protein phosphatase-like n / Homo sapiens Q16849
- Syndecan-2 / Homo sapiens P34741
- Transmembrane protein C16orf54 / Homo sapiens Q6UWD8
- Tumor necrosis factor receptor superfamily member 6 / Homo sapiens P25445
- Uromodulin / Homo sapiens P07911
- Vasorin / Homo sapiens Q6EMK4
- Vitamin k-dependent protein c / Homo sapiens P04070
- Zinc-alpha-2-glycoprotein / Homo sapiens P25311
Protein
- Urine (UBERON_0001088)
Source
Reported structure
- HexNAc:1 (avg mass : 221.2103 )
- Hex:1 HexNAc:1 (avg mass : 383.3527 )
- Hex:1 HexNAc:1 Su:1 (avg mass : 463.4169 )
- Hex:1 HexNAc:2 (avg mass : 586.5477 )
- Hex:2 HexNAc:2 (avg mass : 748.6901 )
- Hex:2 HexNAc:2 dHex:1 (avg mass : 894.8331 )
- Hex:5 HexNAc:4 (avg mass : 1641.5073 )
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:6 HexNAc:5 (avg mass : 2006.8447 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
- Hex:7 HexNAc:6 dHex:1 (avg mass : 2518.3251 )
Composition
Disease
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-2-HS-glycoprotein / Homo sapiens
- Apolipoprotein C-III / Homo sapiens
- Apolipoprotein D / Homo sapiens
- Apolipoprotein F / Homo sapiens
- Basement membrane-specific heparan sulfate proteoglycan core protein / Homo sapiens
- Carboxypeptidase b2 / Homo sapiens
- CD27 antigen / Homo sapiens
- Collagen alpha-1(xv) chain / Homo sapiens
- Complement component c7 / Homo sapiens
- Cyclic amp-responsive element-binding protein 3-like protein 3 / Homo sapiens
- Ecto-adp-ribosyltransferase 3 / Homo sapiens
- Fractalkine / Homo sapiens
- Glycophorin a, b and c / Homo sapiens
- Hepatitis a virus cellular receptor 2 / Homo sapiens
- HLA class II histocompatibility antigen gamma chain / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Insulin-like growth factor II / Homo sapiens
- Interleukin-18-binding protein / Homo sapiens
- Microfibrillar-associated protein 5 / Homo sapiens
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens
- Plasma protease c1 inhibitor / Homo sapiens
- Plasma serine protease inhibitor / Homo sapiens
- Poliovirus receptor / Homo sapiens
- Proheparin-binding EGF-like growth factor / Homo sapiens
- Prosaas / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Protein AMBP / Homo sapiens
- Protein delta homolog 1 / Homo sapiens
- Protein heg homolog 1 / Homo sapiens
- Protein YIPF3 / Homo sapiens
- Prothrombin / Homo sapiens
- Receptor-type tyrosine-protein phosphatase-like n / Homo sapiens
- Syndecan-2 / Homo sapiens
- Transmembrane protein C16orf54 / Homo sapiens
- Tumor necrosis factor receptor superfamily member 6 / Homo sapiens
- Uromodulin / Homo sapiens
- Vasorin / Homo sapiens
- Vitamin k-dependent protein c / Homo sapiens
- Zinc-alpha-2-glycoprotein / Homo sapiens
Reported glycosite
Mass spectrometry observed peptide
-
- Hex:5 HexNAc:4 / N-Linked
(avg mass : 1641.5073)
- Urine (UBERON_0001088)
- Alpha-1-antitrypsin / Homo sapiens
- Alpha-2-HS-glycoprotein / Homo sapiens
- Carboxypeptidase b2 / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Interleukin-18-binding protein / Homo sapiens
- Plasma protease c1 inhibitor / Homo sapiens
- Poliovirus receptor / Homo sapiens
- Protein AMBP / Homo sapiens
- Prothrombin / Homo sapiens
- Vasorin / Homo sapiens
- Zinc-alpha-2-glycoprotein / Homo sapiens
-
- Hex:5 HexNAc:4 dHex:1 / N-Linked
(avg mass : 1787.6503)
- Urine (UBERON_0001088)
- Interleukin-18-binding protein / Homo sapiens
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
-
- Hex:6 HexNAc:5 / N-Linked
(avg mass : 2006.8447)
- Urine (UBERON_0001088)
- Alpha-1-acid glycoprotein 1 / Homo sapiens
- Alpha-1-acid glycoprotein 2 / Homo sapiens
- Apolipoprotein D / Homo sapiens
- Uromodulin / Homo sapiens
-
- Hex:7 HexNAc:6 / N-Linked
(avg mass : 2372.1821)
- Urine (UBERON_0001088)
- Uromodulin / Homo sapiens
-
- Hex:7 HexNAc:6 dHex:1 / N-Linked
(avg mass : 2518.3251)
- Urine (UBERON_0001088)
- Apolipoprotein D / Homo sapiens
- Uromodulin / Homo sapiens
-
- Hex:1 HexNAc:1 Su:1 / O-Linked
(avg mass : 463.4169)
- Urine (UBERON_0001088)
- Microfibrillar-associated protein 5 / Homo sapiens
-
- Hex:1 HexNAc:2 / O-Linked
(avg mass : 586.5477)
- Urine (UBERON_0001088)
- Protein YIPF3 / Homo sapiens
-
- HexNAc:1 / O-Linked
(avg mass : 221.2103)
- Urine (UBERON_0001088)
- Microfibrillar-associated protein 5 / Homo sapiens
- Protein YIPF3 / Homo sapiens
-
- Hex:1 HexNAc:1 / O-Linked
(avg mass : 383.3527)
- Urine (UBERON_0001088)
- Alpha-2-HS-glycoprotein / Homo sapiens
- Apolipoprotein C-III / Homo sapiens
- Apolipoprotein F / Homo sapiens
- Basement membrane-specific heparan sulfate proteoglycan core protein / Homo sapiens
- CD27 antigen / Homo sapiens
- Collagen alpha-1(xv) chain / Homo sapiens
- Complement component c7 / Homo sapiens
- Cyclic amp-responsive element-binding protein 3-like protein 3 / Homo sapiens
- Ecto-adp-ribosyltransferase 3 / Homo sapiens
- Fractalkine / Homo sapiens
- Glycophorin a, b and c / Homo sapiens
- Hepatitis a virus cellular receptor 2 / Homo sapiens
- HLA class II histocompatibility antigen gamma chain / Homo sapiens
- Insulin-like growth factor II / Homo sapiens
- Interleukin-18-binding protein / Homo sapiens
- Microfibrillar-associated protein 5 / Homo sapiens
- Phosphoinositide-3-kinase-interacting protein 1 / Homo sapiens
- Plasma serine protease inhibitor / Homo sapiens
- Proheparin-binding EGF-like growth factor / Homo sapiens
- Prosaas / Homo sapiens
- Protein delta homolog 1 / Homo sapiens
- Protein heg homolog 1 / Homo sapiens
- Protein YIPF3 / Homo sapiens
- Receptor-type tyrosine-protein phosphatase-like n / Homo sapiens
- Syndecan-2 / Homo sapiens
- Transmembrane protein C16orf54 / Homo sapiens
- Tumor necrosis factor receptor superfamily member 6 / Homo sapiens
- Vitamin k-dependent protein c / Homo sapiens
-
- Hex:2 HexNAc:2 / O-Linked
(avg mass : 748.6901)
- Urine (UBERON_0001088)
- Interleukin-18-binding protein / Homo sapiens
- Protein YIPF3 / Homo sapiens
-
- Hex:2 HexNAc:2 dHex:1 / O-Linked
(avg mass : 894.8331)
- Hex:2 HexNAc:2 dHex:1 / O-Linked
(avg mass : 894.8331)
Source
Suggested structure
Reported glycosite
- Hex:2 HexNAc:2 / O-Linked
(avg mass : 748.6901)
Source
Suggested structure
Reported glycosite
- Hex:1 HexNAc:1 / O-Linked
(avg mass : 383.3527)
Source
Suggested structure
Reported glycosite
- HexNAc:1 / O-Linked
(avg mass : 221.2103)
Source
Suggested structure
Reported glycosite
- Hex:1 HexNAc:2 / O-Linked
(avg mass : 586.5477)
Source
Suggested structure
Reported glycosite
- Hex:1 HexNAc:1 Su:1 / O-Linked
(avg mass : 463.4169)
Source
Suggested structure
Reported glycosite
- Hex:7 HexNAc:6 dHex:1 / N-Linked
(avg mass : 2518.3251)
Source
Suggested structure
Reported glycosite
- Hex:7 HexNAc:6 / N-Linked
(avg mass : 2372.1821)
Source
Suggested structure
Reported glycosite
- Hex:6 HexNAc:5 / N-Linked
(avg mass : 2006.8447)
Source
Suggested structure
Reported glycosite
- Hex:5 HexNAc:4 dHex:1 / N-Linked
(avg mass : 1787.6503)
Source
Suggested structure
Reported glycosite
- Hex:5 HexNAc:4 / N-Linked
(avg mass : 1641.5073)
