Reliable determination of site-specific in vivo protein N-glycosylation based on collision-induced MS/MS and chromatographic retention time (2014)
Wang B, Tsybovsky Y, Palczewski K, Chance MR.
J Am Soc Mass Spectrom, 2014 vol.25(5):729-41
SNFG,
Text,
Oxford
taxonomy (1)
protein (1)
source (1)
structure (0)
composition (12)
disease (0)
reference (1)
site (6)
peptide (0)
- Bos taurus (Bovine)
Taxonomy
- Retina (UBERON_0000966)
Source
Reported structure
- Hex:3 HexNAc:3 (avg mass : 1114.0275 )
- Hex:3 HexNAc:4 (avg mass : 1317.2225 )
- Hex:4 HexNAc:2 (avg mass : 1072.9749 )
- Hex:5 HexNAc:2 (avg mass : 1235.1173 )
- Hex:5 HexNAc:3 NeuAc:1 (avg mass : 1729.5702 )
- Hex:6 HexNAc:2 (avg mass : 1397.2597 )
- Hex:6 HexNAc:3 (avg mass : 1600.4547 )
- Hex:6 HexNAc:3 Ph:1 (avg mass : 1680.4346 )
- Hex:6 HexNAc:3 NeuAc:1 (avg mass : 1891.7126 )
- Hex:7 HexNAc:2 (avg mass : 1559.4021 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:9 HexNAc:2 (avg mass : 1883.6869 )
Composition
Disease
- Uncharacterized protein (gene name abca4) / Bos taurus
Reported glycosite
Mass spectrometry observed peptide
-
- Hex:6 HexNAc:3 Ph:1 / N-Linked
(avg mass : 1680.4346)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:4 HexNAc:2 / N-Linked
(avg mass : 1072.9749)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:3 HexNAc:3 / N-Linked
(avg mass : 1114.0275)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:5 HexNAc:2 / N-Linked
(avg mass : 1235.1173)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:3 HexNAc:4 / N-Linked
(avg mass : 1317.2225)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:6 HexNAc:2 / N-Linked
(avg mass : 1397.2597)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:7 HexNAc:2 / N-Linked
(avg mass : 1559.4021)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:6 HexNAc:3 / N-Linked
(avg mass : 1600.4547)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:8 HexNAc:2 / N-Linked
(avg mass : 1721.5445)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:5 HexNAc:3 NeuAc:1 / N-Linked
(avg mass : 1729.5702)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:9 HexNAc:2 / N-Linked
(avg mass : 1883.6869)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
-
- Hex:6 HexNAc:3 NeuAc:1 / N-Linked
(avg mass : 1891.7126)
- Retina (UBERON_0000966)
- Uncharacterized protein (gene name abca4) / Bos taurus
Source
Suggested structure
Reported glycosite
- Hex:6 HexNAc:3 NeuAc:1 / N-Linked
(avg mass : 1891.7126)
Source
Suggested structure
Reported glycosite
- Hex:9 HexNAc:2 / N-Linked
(avg mass : 1883.6869)
Source
Suggested structure
Reported glycosite
- Hex:5 HexNAc:3 NeuAc:1 / N-Linked
(avg mass : 1729.5702)
Source
Suggested structure
Reported glycosite
- Hex:8 HexNAc:2 / N-Linked
(avg mass : 1721.5445)
Source
Suggested structure
Reported glycosite
- Hex:6 HexNAc:3 / N-Linked
(avg mass : 1600.4547)
Source
Suggested structure
Reported glycosite
- Hex:7 HexNAc:2 / N-Linked
(avg mass : 1559.4021)
Source
Suggested structure
Reported glycosite
- Hex:6 HexNAc:2 / N-Linked
(avg mass : 1397.2597)
Source
Suggested structure
Reported glycosite
- Hex:3 HexNAc:4 / N-Linked
(avg mass : 1317.2225)
Source
Suggested structure
Reported glycosite
- Hex:5 HexNAc:2 / N-Linked
(avg mass : 1235.1173)
Source
Suggested structure
Reported glycosite
- Hex:3 HexNAc:3 / N-Linked
(avg mass : 1114.0275)
Source
Suggested structure
Reported glycosite
- Hex:4 HexNAc:2 / N-Linked
(avg mass : 1072.9749)
Source
Suggested structure
Reported glycosite
- Hex:6 HexNAc:3 Ph:1 / N-Linked
(avg mass : 1680.4346)
