Structure determination of the major N- and O-linked carbohydrate chains of the beta subunit from equine chorionic gonadotropin. (1990)
Damm J, Hard K, Kamerling J, van Dedem G, Vliegenthart J
Eur J Biochem, 1990 vol.189:175-183
SNFG,
Text,
Oxford
taxonomy (1)
protein (1)
source (1)
structure (10)
composition (8)
disease (0)
reference (1)
site (1)
peptide (0)
- Equus caballus (Domestic horse)
Taxonomy
- Blood Serum (UBERON_0001977)
Source
- N-Linked / Complex / NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Neu4,5Ac2(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Neu4,5Ac2(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-6)[NeuAc(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Neu4,5Ac2(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Neu4,5Ac2(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Neu?c(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Neu?c(a2-6)Gal(b1-4)GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- O-Linked / Core 1 / NeuAc(a2-3)Gal(b1-3)GalNAc
- O-Linked / Core 1 / NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc
- O-Linked / Core 2 / Gal(b1-4)GlcNAc(b1-6)[NeuAc(a2-3)Gal(b1-3)]GalNAc
- O-Linked / Core 2 / NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-6)[Gal(b1-3)]GalNAc
- O-Linked / Core 2 / NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-6)[NeuAc(a2-3)Gal(b1-3)]GalNAc
Reported structure
- Hex:1 HexNAc:1 NeuAc:1 (avg mass : 674.6106 )
- Hex:1 HexNAc:1 NeuAc:2 (avg mass : 965.8685 )
- Hex:2 HexNAc:2 NeuAc:1 (avg mass : 1039.948 )
- Hex:2 HexNAc:2 NeuAc:2 (avg mass : 1331.2059 )
- Hex:5 HexNAc:4 NeuAc:2 (avg mass : 2224.0231 )
- Hex:5 HexNAc:4 NeuAc:2 Ac:1 (avg mass : 2266.0598 )
- Hex:5 HexNAc:4 NeuAc:2 Ac:2 (avg mass : 2308.0965 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:2 (avg mass : 2370.1661 )
Composition
Disease
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
Reported glycosite
Mass spectrometry observed peptide
-
- N-Linked / Complex
(avg mass : 2224.0231)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- N-Linked / Complex
(avg mass : 2266.0598)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- N-Linked / Complex
(avg mass : 2266.0598)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- N-Linked / Complex
(avg mass : 2308.0965)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- N-Linked / Complex
(avg mass : 2370.1661)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- O-Linked / Core 1
(avg mass : 674.6106)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- O-Linked / Core 1
(avg mass : 965.8685)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- O-Linked / Core 2
(avg mass : 1039.948)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- O-Linked / Core 2
(avg mass : 1039.948)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
-
- O-Linked / Core 2
(avg mass : 1331.2059)
- Blood Serum (UBERON_0001977)
-
Choriogonadotropin beta chain / Equus caballus
- Undefined site
Source
Reported glycosite
- O-Linked / Core 2
(avg mass : 1331.2059)
Source
Reported glycosite
- O-Linked / Core 2
(avg mass : 1039.948)
Source
Reported glycosite
- O-Linked / Core 2
(avg mass : 1039.948)
Source
Reported glycosite
- O-Linked / Core 1
(avg mass : 965.8685)
Source
Reported glycosite
- O-Linked / Core 1
(avg mass : 674.6106)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2370.1661)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2308.0965)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2266.0598)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2266.0598)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2224.0231)