taxonomy (1)
protein (1)
source (2)
structure (7)
composition (8)
disease (3)
reference (2)
site (44)
peptide (1)
- Homo sapiens (Human)
Taxonomy
- O-Linked / Core 0 / GalNAc
- O-Linked / Core 1 / Gal(b1-3)GalNAc
- O-Linked / Core 1 / Gal(b1-3)GalNAc(a + "Neu5Ac(a"
- O-Linked / Core 1 / NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc
- O-Linked / Core 2 / Gal(b1-3)[GlcNAc(b1-6)]GalNAc
- O-Linked / Core 2 / Gal(b1-4)GlcNAc(b1-6)[Gal(b1-3)]GalNAc
- O-Linked / Undefined core / GlcNAc(?1-?)GalNAc
Reported structure
- HexNAc:1 (avg mass : 221.2103 )
- HexNAc:2 (avg mass : 424.4053 )
- Hex:1 HexNAc:1 (avg mass : 383.3527 )
- Hex:1 HexNAc:1 NeuAc:1 (avg mass : 674.6106 )
- Hex:1 HexNAc:1 NeuAc:2 (avg mass : 965.8685 )
- Hex:1 HexNAc:2 (avg mass : 586.5477 )
- Hex:2 HexNAc:2 (avg mass : 748.6901 )
- Hex:5 HexNAc:2 (avg mass : 1235.1173 )
Composition
- Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed
- The O-glycomap of lubricin, a novel mucin responsible for joint lubrication, identified by site-specific glycopeptide analysis (2014 - Ali L, Flowers SA, Jin C, Bennet EP, Ekwall AK, Karlsson NG) / Status : Reviewed
Reference
-
Proteoglycan 4 (lubricin) / Homo sapiens
- Ser-123
- Ser-136
- Thr-240
- Thr-253
- Thr-277
- Thr-291
- Thr-305
- Ser-306
- Thr-310
- Ser-317
- Thr-324
- Thr-332
- Thr-338
- Thr-367
- Thr-407
- Thr-415
- Ser-427
- Thr-430
- Thr-485
- Ser-529
- Thr-532
- Thr-540
- Thr-541
- Ser-553
- Thr-555
- Thr-619
- Thr-627
- Thr-676
- Ser-812
- Thr-829
- Ser-892
- Thr-900
- Thr-930
- Thr-931
- Ser-962
- Thr-963
- Thr-968
- Thr-975
- Thr-978
- Thr-979
- Thr-980
- Thr-1039
- Asn-1159
- Thr-1161
Reported glycosite
- NGTLVAFR (8aa)
Mass spectrometry observed peptide
-
- O-Linked / Core 0 (avg mass : 221.2103)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- O-Linked / Core 1 (avg mass : 383.3527)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- O-Linked / Core 1 (avg mass : 674.6106)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- O-Linked / Core 1 (avg mass : 965.8685)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- O-Linked / Core 2 (avg mass : 586.5477)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- O-Linked / Core 2 (avg mass : 748.6901)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- O-Linked / Undefined core (avg mass : 424.4053)
- Synovial Fluid (UBERON_0001090)
- Proteoglycan 4 (lubricin) / Homo sapiens
-
- Hex:5 HexNAc:2 / N-Linked (avg mass : 1235.1173)
- Mammary Gland (UBERON_0001911)
- Cancer, breast (DOID:1612)
- Proteoglycan 4 (lubricin) / Homo sapiens
- NGTLVAFR (8aa)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
Source
Reported glycosite
Suggested glycosite
Source
Reported glycosite
Suggested glycosite
Source
Reported glycosite
Suggested glycosite
Source
Reported glycosite
Suggested glycosite
Source
Reported glycosite
Suggested glycosite
Source
Reported glycosite
Suggested glycosite
Source
Reported glycosite
Suggested glycosite
