GlyConnect

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Site	Core / Type	Cartoon	Composition	Biological associations
Thr-216	O-Linked / Undefined core		Hex:1 HexNAc:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (0) reference (1) site (3) peptide (0) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Cerebrospinal Fluid (UBERON_0001359) Reported structure Composition Hex:1 HexNAc:1 (avg mass : 383.3527 ) Disease Reference LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins (2013 - Halim A, Rüetschi U, Larson G, Nilsson J) / Status : Reviewed Reported glycosite Secretogranin-3 / Homo sapiens Thr-216 Thr-231 Ser-359 Mass spectrometry observed peptide
Thr-231	O-Linked / Undefined core		Hex:1 HexNAc:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (0) reference (1) site (3) peptide (0) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Cerebrospinal Fluid (UBERON_0001359) Reported structure Composition Hex:1 HexNAc:1 (avg mass : 383.3527 ) Disease Reference LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins (2013 - Halim A, Rüetschi U, Larson G, Nilsson J) / Status : Reviewed Reported glycosite Secretogranin-3 / Homo sapiens Thr-216 Thr-231 Ser-359 Mass spectrometry observed peptide
Asn-346	N-Linked / Undefined core		Hex:7 HexNAc:6 dHex:1 NeuAc:2	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:7 HexNAc:6 dHex:1 NeuAc:2 (avg mass : 3100.8409 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:4 dHex:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:4 dHex:1 (avg mass : 1949.7927 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:5 NeuAc:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:5 NeuAc:1 (avg mass : 2298.1026 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:5 NeuAc:2	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:5 NeuAc:2 (avg mass : 2589.3605 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:7 HexNAc:2	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:7 HexNAc:2 (avg mass : 1559.4021 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:6	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:6 (avg mass : 2210.0397 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:5 HexNAc:6 dHex:1 NeuAc:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:6 dHex:1 NeuAc:1 (avg mass : 2485.2982 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:6 dHex:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:6 dHex:1 (avg mass : 2356.1827 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:7 HexNAc:6 dHex:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:7 HexNAc:6 dHex:1 (avg mass : 2518.3251 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:3 HexNAc:7	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:3 HexNAc:7 (avg mass : 1926.8075 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:8 HexNAc:7 dHex:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:8 HexNAc:7 dHex:1 (avg mass : 2883.6625 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:5 dHex:2 NeuAc:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:5 dHex:2 NeuAc:1 (avg mass : 2590.3886 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Asn-346	N-Linked / Undefined core		Hex:6 HexNAc:6 NeuAc:2	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (1) reference (1) site (1) peptide (1) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:6 HexNAc:6 NeuAc:2 (avg mass : 2792.5555 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Secretogranin-3 / Homo sapiens Asn-346 Mass spectrometry observed peptide NATDNISK (8aa) Q8WXD2 Asn-346 Secretogranin-3 / Homo sapiens
Ser-359	O-Linked / Undefined core		Hex:1 HexNAc:1	taxonomy (1) protein (1) source (1) structure (0) composition (1) disease (0) reference (1) site (3) peptide (0) Taxonomy Homo sapiens (Human) Protein Secretogranin-3 / Homo sapiens Q8WXD2 Source Cerebrospinal Fluid (UBERON_0001359) Reported structure Composition Hex:1 HexNAc:1 (avg mass : 383.3527 ) Disease Reference LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins (2013 - Halim A, Rüetschi U, Larson G, Nilsson J) / Status : Reviewed Reported glycosite Secretogranin-3 / Homo sapiens Thr-216 Thr-231 Ser-359 Mass spectrometry observed peptide

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