GlyConnect

Site	Core / Type	Cartoon	Composition	Biological associations
Undefined site	O-Linked / Undefined core		Hex:1 HexNAc:1 NeuAc:1	Taxonomy (1) Protein (1) Source (1) Structure (1) Composition (1) Disease (1) Reference (1) Site (1) Peptide (0) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source A-431 (CVCL_0037) Skin of Body (UBERON_0002097) Fibroblast (CL_0000057) Reported structure O-Linked / Undefined core / Gal(?1-?)GalNAc+"+ NeuAc" Composition Hex:1 HexNAc:1 NeuAc:1 (avg mass : 674.6106 ) Disease Carcinoma, Squamous cell (DOID:1749) Reference Biosynthesis of N- and O-linked oligosaccharides of the low density lipoprotein receptor. (1983 - Cummings R, Kornfeld S, Schneider W, Hobgood K, Tolleshaug H, Brown M, Goldstein J) / Status : Reviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Undefined site Mass spectrometry validated peptide
Undefined site	O-Linked / Core 0		HexNAc:1	Taxonomy (1) Protein (1) Source (1) Structure (1) Composition (1) Disease (1) Reference (1) Site (1) Peptide (0) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source A-431 (CVCL_0037) Skin of Body (UBERON_0002097) Fibroblast (CL_0000057) Reported structure O-Linked / Core 0 / GalNAc Composition HexNAc:1 (avg mass : 221.2103 ) Disease Carcinoma, Squamous cell (DOID:1749) Reference Biosynthesis of N- and O-linked oligosaccharides of the low density lipoprotein receptor. (1983 - Cummings R, Kornfeld S, Schneider W, Hobgood K, Tolleshaug H, Brown M, Goldstein J) / Status : Reviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Undefined site Mass spectrometry validated peptide
Undefined site	O-Linked / Undefined core		HexNAc:2	Taxonomy (1) Protein (1) Source (1) Structure (1) Composition (1) Disease (0) Reference (1) Site (1) Peptide (0) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Skin of Body (UBERON_0002097) Fibroblast (CL_0000057) Reported structure O-Linked / Undefined core / GlcNAc(?1-?)GalNAc Composition HexNAc:2 (avg mass : 424.4053 ) Disease Reference Biosynthesis of N- and O-linked oligosaccharides of the low density lipoprotein receptor. (1983 - Cummings R, Kornfeld S, Schneider W, Hobgood K, Tolleshaug H, Brown M, Goldstein J) / Status : Reviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Undefined site Mass spectrometry validated peptide
Undefined site	O-Linked / Undefined core		Hex:1 HexNAc:1 NeuAc:2	Taxonomy (1) Protein (1) Source (1) Structure (1) Composition (1) Disease (1) Reference (1) Site (1) Peptide (0) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source A-431 (CVCL_0037) Skin of Body (UBERON_0002097) Fibroblast (CL_0000057) Reported structure O-Linked / Undefined core / Gal(?1-?)GalNAc+"+ 2 x NeuAc" Composition Hex:1 HexNAc:1 NeuAc:2 (avg mass : 965.8685 ) Disease Carcinoma, Squamous cell (DOID:1749) Reference Biosynthesis of N- and O-linked oligosaccharides of the low density lipoprotein receptor. (1983 - Cummings R, Kornfeld S, Schneider W, Hobgood K, Tolleshaug H, Brown M, Goldstein J) / Status : Reviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Undefined site Mass spectrometry validated peptide
Asn-272	N-Linked / Undefined core		Hex:5 HexNAc:4 dHex:1 NeuAc:1	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 2078.9082 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-272 Mass spectrometry validated peptide DMSDEVGCVNVTLCEGPNK (19aa) P01130 Asn-272
Asn-272	N-Linked / Undefined core		Hex:6 HexNAc:5 dHex:1 NeuAc:2	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Blood Serum (UBERON_0001977) Reported structure Composition Hex:6 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2735.5035 ) Disease Prostate cancer (DOID:10283) Reference Large-scale intact glycopeptide identification by Mascot database search (2018 - Ravi Chand Bollineni, Christian Jeffrey Koehler, Randi Elin Gislefoss, Jan Haug Anonsen, Bernd Thiede) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-272 Mass spectrometry validated peptide DMSDEVGCVNVTLCEGPNK (19aa) P01130 Asn-272
Asn-272	N-Linked / Undefined core		Hex:5 HexNAc:4 dHex:3	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (2) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-272 Asn-657 Mass spectrometry validated peptide DMSDEVGCVNVTLCEGPNK (19aa) P01130 Asn-272
Asn-272	N-Linked / Undefined core		Hex:5 HexNAc:4 dHex:4	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (2) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:4 dHex:4 Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-272 Asn-657 Mass spectrometry validated peptide DMSDEVGCVNVTLCEGPNK (19aa) P01130 Asn-272
Asn-515	N-Linked / Undefined core		Hex:6 HexNAc:6 NeuAc:2	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Blood Serum (UBERON_0001977) Reported structure Composition Hex:6 HexNAc:6 NeuAc:2 (avg mass : 2792.5555 ) Disease Prostate cancer (DOID:10283) Reference Large-scale intact glycopeptide identification by Mascot database search (2018 - Ravi Chand Bollineni, Christian Jeffrey Koehler, Randi Elin Gislefoss, Jan Haug Anonsen, Bernd Thiede) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-515 Mass spectrometry validated peptide ENGSKPR (7aa) P01130 Asn-515
Asn-657	N-Linked / Undefined core		Hex:4 HexNAc:2 dHex:1	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:4 HexNAc:2 dHex:1 (avg mass : 1219.1179 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-657 Mass spectrometry validated peptide VLFHNLTQPR (10aa) P01130 Asn-657
Asn-657	N-Linked / Undefined core		Hex:12 HexNAc:2	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:12 HexNAc:2 (avg mass : 2370.1141 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-657 Mass spectrometry validated peptide ITGSDVNIIAENIISPEDMVIFHNITQPR (29aa) P01130 Asn-657
Asn-657	N-Linked / Undefined core		Hex:5 HexNAc:4 dHex:2 NeuAc:1	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:4 dHex:2 NeuAc:1 (avg mass : 2225.0512 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-657 Mass spectrometry validated peptide ITGSDVNIIAENIISPEDMVIFHNITQPR (29aa) P01130 Asn-657
Asn-657	N-Linked / Undefined core		Hex:5 HexNAc:4 dHex:3	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (2) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-272 Asn-657 Mass spectrometry validated peptide ITGSDVNIIAENIISPEDMVIFHNITQPR (29aa) P01130 Asn-657
Asn-657	N-Linked / Undefined core		Hex:7 HexNAc:6	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:7 HexNAc:6 (avg mass : 2372.1821 ) Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-657 Mass spectrometry validated peptide ITGSDVNIIAENIISPEDMVIFHNITQPR (29aa) P01130 Asn-657
Asn-657	N-Linked / Undefined core		Hex:5 HexNAc:4 dHex:4	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (2) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Mammary Gland (UBERON_0001911) Reported structure Composition Hex:5 HexNAc:4 dHex:4 Disease Cancer, breast (DOID:1612) Reference Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-272 Asn-657 Mass spectrometry validated peptide ITGSDVNIIAENIISPEDMVIFHNITQPR (29aa) P01130 Asn-657
Asn-665	N-Linked / Undefined core		Hex:5 HexNAc:4 NeuAc:2	Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (1) Disease (1) Reference (1) Site (1) Peptide (1) Taxonomy Homo sapiens (Human) Protein Low-density lipoprotein receptor / Homo sapiens P01130 Source Blood Serum (UBERON_0001977) Reported structure Composition Hex:5 HexNAc:4 NeuAc:2 (avg mass : 2224.0231 ) Disease Prostate cancer (DOID:10283) Reference Large-scale intact glycopeptide identification by Mascot database search (2018 - Ravi Chand Bollineni, Christian Jeffrey Koehler, Randi Elin Gislefoss, Jan Haug Anonsen, Bernd Thiede) / Status : Unreviewed Reported glycosite Low-density lipoprotein receptor / Homo sapiens : Asn-665 Mass spectrometry validated peptide GVNWCER (7aa) P01130 Asn-665

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