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  • Transmembrane protein 2

Transmembrane protein 2

Taxonomy : Mus musculus

SNFG, Text, Oxford
Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (4) Disease (0) Site (4) Peptide (4)

    Taxonomy

  • Mus musculus (House mouse)

    Protein

  • Transmembrane protein 2 / Mus musculus    Q5FWI3

    Source

  • Brain (UBERON_0000955)  

    Reported structure

    Composition

  • Hex:4 HexNAc:2 (avg mass : 1072.9749 )
  • Hex:3 HexNAc:2 dHex:1 (avg mass : 1056.9755 )
  • Hex:5 HexNAc:2 (avg mass : 1235.1173 )
  • Hex:6 HexNAc:2 (avg mass : 1397.2597 )

    Disease

    Reported glycosite

  • Transmembrane protein 2 / Mus musculus :
    •        Asn-292
    •        Asn-636
    •        Asn-980
    •        Asn-1234

    Mass spectrometry validated peptide

  • VLENEKFDTHEYHNESR (17aa)
    •    Q5FWI3    Asn-292
  • NILYHNLGLLTKPGTLLPTDRNSSMCTVMR (30aa)
    •    Q5FWI3    Asn-636
  • HPNCVNVTK (9aa)
    •    Q5FWI3    Asn-980
  • GDPSIISVNGTDFTFR (16aa)
    •    Q5FWI3    Asn-1234
  • 5 x 2 x
    • Hex:5 HexNAc:2 (avg mass : 1235.1173 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Transmembrane protein 2 / Mus musculus :
        •        Asn-980
  • 4 x 2 x
    • Hex:4 HexNAc:2 (avg mass : 1072.9749 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Transmembrane protein 2 / Mus musculus :
        •        Asn-980
  • 3 x 2 x 1 x
    • Hex:3 HexNAc:2 dHex:1 (avg mass : 1056.9755 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Transmembrane protein 2 / Mus musculus :
        •        Asn-292
  • 6 x 2 x
    • Hex:6 HexNAc:2 (avg mass : 1397.2597 )
    • Site (2) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Transmembrane protein 2 / Mus musculus :
        •        Asn-636
        •        Asn-1234

Protein and gene references

UniProtKB : Q5FWI3

3D structure from PDB

Either no PDB or existing PDB of non-glycosylated form

References (1)

Capturing site-specific heterogeneity with large-scale N-glycoproteome analysis (2019)
Nicholas M. Riley, Alexander S. Hebert, Michael S. Westphall & Joshua J. Coon
Pubmed : 30899004   DOI : 10.1038/s41467-019-09222-w
Status : Unreviewed

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