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  • Laminin subunit alpha-5

Laminin subunit alpha-5

Taxonomy : Mus musculus

SNFG, Text, Oxford
Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (7) Disease (0) Site (8) Peptide (8)

    Taxonomy

  • Mus musculus (House mouse)

    Protein

  • Laminin subunit alpha-5 / Mus musculus    Q61001

    Source

  • Brain (UBERON_0000955)  

    Reported structure

    Composition

  • Hex:3 HexNAc:6 (avg mass : 1723.6125 )
  • Hex:4 HexNAc:6 (avg mass : 1885.7549 )
  • Hex:8 HexNAc:2 (avg mass : 1721.5445 )
  • Hex:5 HexNAc:2 (avg mass : 1235.1173 )
  • Hex:6 HexNAc:2 (avg mass : 1397.2597 )
  • Hex:9 HexNAc:2 (avg mass : 1883.6869 )
  • Hex:7 HexNAc:2 (avg mass : 1559.4021 )

    Disease

    Reported glycosite

  • Laminin subunit alpha-5 / Mus musculus :
    •        Asn-100
    •        Asn-383
    •        Asn-964
    •        Asn-1335
    •        Asn-2425
    •        Asn-2709
    •        Asn-3261
    •        Asn-3291

    Mass spectrometry validated peptide

  • LVGGPVAGGDPNQTIQGQYCDICTAANSNK (30aa)
    •    Q61001    Asn-100
  • NASQNQDNVYQGGGVCLDCQHHTTGINCER (30aa)
    •    Q61001    Asn-383
  • LSSCTNCTEQSQPVAFPPSTEPAFVTVPQR (30aa)
    •    Q61001    Asn-964
  • IWQGHANASFCPHGYGCR (18aa)
    •    Q61001    Asn-1335
  • QELSQDNATLK (11aa)
    •    Q61001    Asn-2425
  • GVHNASLALSANIGR (15aa)
    •    Q61001    Asn-2709
  • LLLGGLPVSGTFHNFSGCISNVFVQR (26aa)
    •    Q61001    Asn-3261
  • VFDLHQNMGSVNVSVGCTPAQLIETSR (27aa)
    •    Q61001    Asn-3291
  • 6 x 2 x
    • Hex:6 HexNAc:2 (avg mass : 1397.2597 )
    • Site (3) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-100
        •        Asn-3261
        •        Asn-3291
  • 3 x 6 x
    • Hex:3 HexNAc:6 (avg mass : 1723.6125 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-3261
  • 8 x 2 x
    • Hex:8 HexNAc:2 (avg mass : 1721.5445 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-3261
  • 9 x 2 x
    • Hex:9 HexNAc:2 (avg mass : 1883.6869 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-1335
  • 5 x 2 x
    • Hex:5 HexNAc:2 (avg mass : 1235.1173 )
    • Site (7) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-100
        •        Asn-383
        •        Asn-964
        •        Asn-2425
        •        Asn-2709
        •        Asn-3261
        •        Asn-3291
  • 4 x 6 x
    • Hex:4 HexNAc:6 (avg mass : 1885.7549 )
    • Site (1) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-3261
  • 7 x 2 x
    • Hex:7 HexNAc:2 (avg mass : 1559.4021 )
    • Site (2) Suggested Structure (0)

        Suggested structure

        Reported glycosite

      • Laminin subunit alpha-5 / Mus musculus :
        •        Asn-3261
        •        Asn-3291

Protein and gene references

UniProtKB : Q61001

3D structure from PDB

Github   Wiki
3D visualization by LiteMol

References (1)

Capturing site-specific heterogeneity with large-scale N-glycoproteome analysis (2019)
Nicholas M. Riley, Alexander S. Hebert, Michael S. Westphall & Joshua J. Coon
Pubmed : 30899004   DOI : 10.1038/s41467-019-09222-w
Status : Unreviewed

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