GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (8) Disease (1) Site (2) Peptide (2)

Taxonomy

Homo sapiens (Human)

Protein

Interleukin-1 receptor type 2 / Homo sapiens P27930

Source

Blood Serum (UBERON_0001977)

Reported structure

Composition

Disease

Prostate cancer (DOID:10283)

Reported glycosite

Interleukin-1 receptor type 2 / Homo sapiens :
- Asn-66
- Asn-219

Mass spectrometry validated peptide

INLTWHK (7aa)
- P27930 Asn-66
CVLTFAHEGQQYNITR (16aa)
- P27930 Asn-219

- Hex:6 HexNAc:5 dHex:2 NeuAc:3
- Hex:6 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2735.5035 )
- Hex:6 HexNAc:5 dHex:2 NeuAc:2 (avg mass : 2881.6465 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:2 (avg mass : 2370.1661 )
- Hex:6 HexNAc:6 dHex:1 NeuAc:3 (avg mass : 3229.9564 )
- Hex:6 HexNAc:6 dHex:2 NeuAc:2
- Hex:5 HexNAc:4 dHex:2 NeuAc:2 (avg mass : 2516.3091 )
- Hex:5 HexNAc:4 NeuAc:2 (avg mass : 2224.0231 )

Cross-references

UniProtKB : P27930

neXtProt : NX_P27930

GeneCards : IL1R2

3D structure from PDB

Select a PDB entry

Github Wiki

3D visualization by LiteMol

References (1)

Large-scale intact glycopeptide identification by Mascot database search (2018)
Ravi Chand Bollineni, Christian Jeffrey Koehler, Randi Elin Gislefoss, Jan Haug Anonsen, Bernd Thiede
Pubmed : 29391424 DOI : 10.1038/s41598-018-20331-2
Status : Unreviewed