GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (8) Disease (1) Site (3) Peptide (3)

Taxonomy

Homo sapiens (Human)

Protein

Zinc transporter ZIP6 / Homo sapiens Q13433

Source

Mammary Gland (UBERON_0001911)

Reported structure

Composition

Disease

Cancer, breast (DOID:1612)

Reported glycosite

Zinc transporter ZIP6 / Homo sapiens :
- Asn-67
- Asn-241
- Asn-266

Mass spectrometry validated peptide

YGENNSISVEGFR (13aa)
- Q13433 Asn-67
KTNESVSEPR (10aa)
- Q13433 Asn-241
NTNENPQECFNASK (14aa)
- Q13433 Asn-266

- Hex:9 HexNAc:2 (avg mass : 1883.6869 )
- Hex:5 HexNAc:4 dHex:2 NeuAc:1 (avg mass : 2225.0512 )
- Hex:4 HexNAc:4 dHex:2 NeuAc:1 (avg mass : 2062.9088 )
- Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:7 HexNAc:2 (avg mass : 1559.4021 )
- Hex:4 HexNAc:6 (avg mass : 1885.7549 )
- Hex:6 HexNAc:5 dHex:3 (avg mass : 2445.2737 )

Protein and gene references

UniProtKB : Q13433

neXtProt : NX_Q13433

GeneCards : SLC39A6

GlycoDomain : Q13433

3D structure from PDB

Either no PDB or existing PDB of non-glycosylated form

References (1)

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed