GlyConnect

Taxonomy (1) Protein (1) Source (2) Structure (0) Composition (2) Disease (1) Site (2) Peptide (2)

Taxonomy

Homo sapiens (Human)

Protein

Sodium channel protein type 4 subunit alpha / Homo sapiens P35499

Source

Blood Serum (UBERON_0001977)
Mammary Gland (UBERON_0001911)

Reported structure

Composition

Hex:4 HexNAc:6 dHex:2 (avg mass : 2178.0409 )
Hex:9 HexNAc:2 (avg mass : 1883.6869 )

Disease

Cancer, breast (DOID:1612)

Reported glycosite

Sodium channel protein type 4 subunit alpha / Homo sapiens :
- Asn-1205
- Asn-1786

Mass spectrometry validated peptide

FDISEVNNK (9aa)
- P35499 Asn-1205
EGLLANTMSKMYGHENGNSSSPSPEEK (27aa)
- P35499 Asn-1786

- Hex:4 HexNAc:6 dHex:2 (avg mass : 2178.0409 )
- Hex:9 HexNAc:2 (avg mass : 1883.6869 )

Cross-references

UniProtKB : P35499

neXtProt : NX_P35499

GeneCards : SCN4A

3D structure from PDB

Select a PDB entry

Github Wiki

3D visualization by LiteMol

References (2)

Site-Specific Profiling of Serum Glycoproteins Using N-Linked Glycan and Glycosite Analysis Revealing Atypical N-Glycosylation Sites on Albumin and α-1B-Glycoprotein (2018)
Shisheng Sun, Yingwei Hu, Li Jia, Shadi Toghi Eshghi, Yang Liu, Punit Shah, Hui Zhang
Pubmed : 29671580 DOI : 10.1021/acs.analchem.8b01051
Status : Unreviewed

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed