GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (4) Disease (1) Site (1) Peptide (2)

Taxonomy

Homo sapiens (Human)

Protein

Protein CASC4 / Homo sapiens Q6P4E1

Source

Mammary Gland (UBERON_0001911)

Reported structure

Composition

Disease

Cancer, breast (DOID:1612)

Reported glycosite

Protein CASC4 / Homo sapiens :
- Asn-150

Mass spectrometry validated peptide

KNNTYIVK (8aa)
- Q6P4E1 Asn-150
NNTYLVK (7aa)
- Q6P4E1 Asn-150

- Hex:3 HexNAc:6 dHex:1 NeuAc:2 (avg mass : 2452.2713 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
- Hex:12 HexNAc:2 (avg mass : 2370.1141 )
- Hex:5 HexNAc:5 dHex:3 (avg mass : 2283.1313 )

Cross-references

UniProtKB : Q6P4E1

neXtProt : NX_Q6P4E1

GeneCards : CASC4

GlycoDomain : Q6P4E1

3D structure from PDB

Either no PDB or existing PDB of non-glycosylated form

References (1)

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed