GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (20) Composition (16) Disease (1) Site (1) Peptide (0)

Taxonomy

Human immunodeficiency virus type 1 (lw12.3 isolate)

Protein

Exterior membrane glycoprotein (gp120) / Human immunodeficiency virus type 1 (lw12.3 isolate) Q70626

Source

H9 (CVCL_1240) Lymphocyte (CL_0000542)

Reported structure

Composition

Disease

Leukemia, Acute lymphoblastic (DOID:9952)

Reported glycosite

Exterior membrane glycoprotein (gp120) / Human immunodeficiency virus type 1 (lw12.3 isolate) :
- Undefined site

Mass spectrometry validated peptide

- N-Linked / High-Mannose (avg mass : 1883.6869 )
- N-Linked / Complex (avg mass : 2356.1827 )
- N-Linked / Complex (avg mass : 2152.9877 )
- N-Linked / Complex (avg mass : 2006.8447 )
- N-Linked / Complex (avg mass : 1787.6503 )
- N-Linked / Complex (avg mass : 2210.0397 )
- N-Linked / Hybrid (avg mass : 1600.4547 )
- N-Linked / Complex (avg mass : 1844.7023 )
- N-Linked / High-Mannose (avg mass : 1235.1173 )
- N-Linked / Complex (avg mass : 2152.9877 )
- N-Linked / Complex (avg mass : 2518.3251 )
- N-Linked / High-Mannose (avg mass : 1397.2597 )
- N-Linked / Complex (avg mass : 2006.8447 )
- N-Linked / High-Mannose (avg mass : 1721.5445 )
- N-Linked / Complex (avg mass : 2721.5201 )
- N-Linked / Complex (avg mass : 2356.1827 )
- N-Linked / Complex (avg mass : 2210.0397 )
- N-Linked / Complex (avg mass : 1990.8453 )
- N-Linked / High-Mannose (avg mass : 1559.4021 )
- N-Linked / Complex (avg mass : 1641.5073 )

Protein and gene references

UniProtKB : Q70626

3D structure from PDB

Either no PDB or existing PDB of non-glycosylated form

References (1)

Diversity of oligosaccharide structures on the envelope glycoprotein gp 120 of human immunodeficiency virus 1 from the lymphoblastoid cell line H9. Presence of complex-type oligosaccharides with bisecting N-acetylglucosamine residues. (1990)
Mizuochi T, Matthews T, Kato M, Hamako J, Titani K, Solomon J, Feizi T
Pubmed : 2341393
Status : Reviewed