GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (9) Disease (1) Site (1) Peptide (1)

Taxonomy

Homo sapiens (Human)

Protein

Integrin alpha-L / Homo sapiens P20701

Source

Mammary Gland (UBERON_0001911)

Reported structure

Composition

Disease

Cancer, breast (DOID:1612)

Reported glycosite

Integrin alpha-L / Homo sapiens :
- Asn-89

Mass spectrometry validated peptide

GSNYTSK (7aa)
- P20701 Asn-89

- Hex:7 HexNAc:6 dHex:1 NeuAc:2 (avg mass : 3100.8409 )
- Hex:6 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2735.5035 )
- Hex:6 HexNAc:3 dHex:3
- Hex:4 HexNAc:3 dHex:1 (avg mass : 1422.3129 )
- Hex:6 HexNAc:3 dHex:2
- Hex:6 HexNAc:6 dHex:1 NeuAc:2 (avg mass : 2938.6985 )
- Hex:5 HexNAc:6 dHex:1 (avg mass : 2194.0403 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
- Hex:6 HexNAc:5 dHex:2 NeuAc:1 (avg mass : 2590.3886 )

Protein and gene references

UniProtKB : P20701

neXtProt : NX_P20701

GeneCards : ITGAL

3D structure from PDB

Select a PDB entry

Github Wiki

3D visualization by LiteMol

References (1)

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed