GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (5) Disease (1) Site (1) Peptide (2)

Taxonomy

Homo sapiens (Human)

Protein

HLA class I histocompatibility antigen, B-35 alpha chain / Homo sapiens P30685

Source

Mammary Gland (UBERON_0001911)

Reported structure

Composition

Disease

Cancer, breast (DOID:1612)

Reported glycosite

HLA class I histocompatibility antigen, B-35 alpha chain / Homo sapiens :
- Asn-110

Mass spectrometry validated peptide

GYYNQSEAGSHIIQR (15aa)
- P30685 Asn-110
YYNQSEAGSHIIQR (14aa)
- P30685 Asn-110

- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 2078.9082 )
- Hex:12 HexNAc:2 (avg mass : 2370.1141 )
- Hex:4 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 2119.9608 )
- Hex:9 HexNAc:2 (avg mass : 1883.6869 )

Protein and gene references

UniProtKB : P30685

neXtProt : NX_P30685

GeneCards : HLA-B

3D structure from PDB

Select a PDB entry

Github Wiki

3D visualization by LiteMol

References (1)

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed