GlyConnect

Taxonomy (1) Protein (1) Source (1) Structure (0) Composition (14) Disease (1) Site (2) Peptide (2)

Taxonomy

Homo sapiens (Human)

Protein

Ephrin-A3 / Homo sapiens P52797

Source

Mammary Gland (UBERON_0001911)

Reported structure

Composition

Disease

Cancer, breast (DOID:1612)

Reported glycosite

Ephrin-A3 / Homo sapiens :
- Asn-38
- Asn-100

Mass spectrometry validated peptide

HAVYWNSSNQHIR (13aa)
- P52797 Asn-38
TCNASQGFK (9aa)
- P52797 Asn-100

- Hex:6 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 2241.0506 )
- Hex:6 HexNAc:4 dHex:3 (avg mass : 2242.0787 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:3 HexNAc:6 dHex:2 NeuAc:1 (avg mass : 2307.1564 )
- Hex:6 HexNAc:6 (avg mass : 2210.0397 )
- Hex:4 HexNAc:5 dHex:2 NeuAc:1 (avg mass : 2266.1038 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 2078.9082 )
- Hex:5 HexNAc:4 dHex:4
- Hex:5 HexNAc:4 dHex:2 NeuAc:1 (avg mass : 2225.0512 )
- Hex:5 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 2282.1032 )
- Hex:9 HexNAc:2 (avg mass : 1883.6869 )
- Hex:5 HexNAc:3 dHex:3
- Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 )
- Hex:12 HexNAc:2 (avg mass : 2370.1141 )

Protein and gene references

UniProtKB : P52797

neXtProt : NX_P52797

GeneCards : EFNA3

3D structure from PDB

Either no PDB or existing PDB of non-glycosylated form

References (1)

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed