GlyConnect

Taxonomy (1) Protein (1) Source (2) Structure (0) Composition (11) Disease (2) Site (1) Peptide (1)

Taxonomy

Homo sapiens (Human)

Protein

Collagen alpha-3(VI) chain / Homo sapiens P12111

Source

Mammary Gland (UBERON_0001911)
Blood Serum (UBERON_0001977)

Reported structure

Composition

Disease

Cancer, breast (DOID:1612)
Prostate cancer (DOID:10283)

Reported glycosite

Collagen alpha-3(VI) chain / Homo sapiens :
- Asn-3037

Mass spectrometry validated peptide

QNLTVTDR (8aa)
- P12111 Asn-3037

- Hex:6 HexNAc:4 dHex:1 (avg mass : 1949.7927 )
- Hex:7 HexNAc:4 dHex:1 (avg mass : 2111.9351 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:4 HexNAc:3 dHex:1 NeuAc:1 (avg mass : 1713.5708 )
- Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 )
- Hex:4 HexNAc:5 dHex:1 (avg mass : 1828.7029 )
- Hex:6 HexNAc:5 NeuAc:2 (avg mass : 2589.3605 )
- Hex:6 HexNAc:4 dHex:3 (avg mass : 2242.0787 )
- Hex:7 HexNAc:2 (avg mass : 1559.4021 )
- Hex:7 HexNAc:6 NeuAc:2 (avg mass : 2954.6979 )
- Hex:6 HexNAc:5 NeuAc:1 (avg mass : 2298.1026 )

References (2)

Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018)
Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang
Pubmed : 29741879 DOI : 10.1021/acs.analchem.8b01137
Status : Unreviewed

Large-scale intact glycopeptide identification by Mascot database search (2018)
Ravi Chand Bollineni, Christian Jeffrey Koehler, Randi Elin Gislefoss, Jan Haug Anonsen, Bernd Thiede
Pubmed : 29391424 DOI : 10.1038/s41598-018-20331-2
Status : Unreviewed