taxonomy (1)
protein (2)
source (2)
structure (1)
composition (30)
disease (1)
reference (2)
site (2)
peptide (1)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
- Recombinant Spike glycoprotein (Schneider 2) - ectodomain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
Protein
- O-Linked / Core 0 / GalNAc
Reported structure
- HexNAc:1 (avg mass : 221.2103 )
- Hex:3 HexNAc:3 (avg mass : 1114.0275 )
- Hex:3 HexNAc:3 dHex:1 (avg mass : 1260.1705 )
- Hex:3 HexNAc:4 dHex:1 (avg mass : 1463.3655 )
- Hex:3 HexNAc:5 dHex:1 (avg mass : 1666.5605 )
- Hex:3 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 1957.8184 )
- Hex:3 HexNAc:6 dHex:2 (avg mass : 2015.8985 )
- Hex:3 HexNAc:6 dHex:3 (avg mass : 2162.0415 )
- Hex:4 HexNAc:4 dHex:1 (avg mass : 1625.5079 )
- Hex:4 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 1916.7658 )
- Hex:4 HexNAc:4 dHex:2 (avg mass : 1771.6509 )
- Hex:4 HexNAc:5 dHex:1 (avg mass : 1828.7029 )
- Hex:4 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 2119.9608 )
- Hex:4 HexNAc:5 dHex:2 (avg mass : 1974.8459 )
- Hex:4 HexNAc:5 dHex:2 NeuAc:1 (avg mass : 2266.1038 )
- Hex:5 HexNAc:2 (avg mass : 1235.1173 )
- Hex:5 HexNAc:3 (avg mass : 1438.3123 )
- Hex:5 HexNAc:3 dHex:1 (avg mass : 1584.4553 )
- Hex:5 HexNAc:4 (avg mass : 1641.5073 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 2078.9082 )
- Hex:5 HexNAc:4 dHex:3 (avg mass : 2079.9363 )
- Hex:5 HexNAc:4 dHex:3 NeuAc:1 (avg mass : 2371.1942 )
- Hex:5 HexNAc:5 dHex:1 (avg mass : 1990.8453 )
- Hex:5 HexNAc:5 dHex:3 (avg mass : 2283.1313 )
- Hex:5 HexNAc:6 dHex:1 NeuAc:1 (avg mass : 2485.2982 )
- Hex:6 HexNAc:2 (avg mass : 1397.2597 )
- Hex:6 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2735.5035 )
- Hex:6 HexNAc:6 dHex:3 (avg mass : 2648.4687 )
- Hex:7 HexNAc:6 (avg mass : 2372.1821 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
Composition
- COVID-19 (DOID:0080600)
Disease
- Site-specific O-glycosylation analysis of SARS-CoV-2 spike protein produced in insect and human cells (2021 - Ieva Bagdonaite, Andrew J. Thompson, Xiaoning Wang, Max Søgaard, Cyrielle Fougeroux, Martin Frank, Jolene K. Diedrich, John R. Yates 3rd, Ali Salanti, Sergey Y. Vakhrushev, James C. Paulson, Hans H. Wandall) / Status : Reviewed
- Site-specific glycan analysis of the SARS-CoV-2 spike (2020 - Yasunori Watanabe, Joel D. Allen, Daniel Wrapp, Jason S. McLellan, Max Crispin) / Status : Unreviewed
Reference
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- Recombinant Spike glycoprotein (Schneider 2) - ectodomain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
Reported glycosite
- YHKNNKSWMESEF (13aa)
Mass spectrometry observed peptide
-
- O-Linked / Core 0
(avg mass : 221.2103)
- Schneider 2 (CVCL_Z232)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (Schneider 2) - ectodomain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:3 / N-Linked
(avg mass : 1114.0275)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:2 / N-Linked
(avg mass : 1235.1173)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:3 dHex:1 / N-Linked
(avg mass : 1260.1705)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:6 HexNAc:2 / N-Linked
(avg mass : 1397.2597)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:3 / N-Linked
(avg mass : 1438.3123)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:4 dHex:1 / N-Linked
(avg mass : 1463.3655)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:3 dHex:1 / N-Linked
(avg mass : 1584.4553)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:4 dHex:1 / N-Linked
(avg mass : 1625.5079)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:4 / N-Linked
(avg mass : 1641.5073)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:5 dHex:1 / N-Linked
(avg mass : 1666.5605)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:8 HexNAc:2 / N-Linked
(avg mass : 1721.5445)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:4 dHex:2 / N-Linked
(avg mass : 1771.6509)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:5 dHex:1 / N-Linked
(avg mass : 1828.7029)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:4 dHex:1 NeuAc:1 / N-Linked
(avg mass : 1916.7658)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:5 dHex:1 NeuAc:1 / N-Linked
(avg mass : 1957.8184)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:5 dHex:2 / N-Linked
(avg mass : 1974.8459)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:5 dHex:1 / N-Linked
(avg mass : 1990.8453)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:6 dHex:2 / N-Linked
(avg mass : 2015.8985)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:4 dHex:1 NeuAc:1 / N-Linked
(avg mass : 2078.9082)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:4 dHex:3 / N-Linked
(avg mass : 2079.9363)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:5 dHex:1 NeuAc:1 / N-Linked
(avg mass : 2119.9608)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:3 HexNAc:6 dHex:3 / N-Linked
(avg mass : 2162.0415)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:4 HexNAc:5 dHex:2 NeuAc:1 / N-Linked
(avg mass : 2266.1038)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:5 dHex:3 / N-Linked
(avg mass : 2283.1313)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:4 dHex:3 NeuAc:1 / N-Linked
(avg mass : 2371.1942)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:7 HexNAc:6 / N-Linked
(avg mass : 2372.1821)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:5 HexNAc:6 dHex:1 NeuAc:1 / N-Linked
(avg mass : 2485.2982)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:6 HexNAc:6 dHex:3 / N-Linked
(avg mass : 2648.4687)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
-
- Hex:6 HexNAc:5 dHex:1 NeuAc:2 / N-Linked
(avg mass : 2735.5035)
- FreeStyle 293-F (CVCL_D603)
- COVID-19 (DOID:0080600)
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- YHKNNKSWMESEF (13aa)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:6 HexNAc:5 dHex:1 NeuAc:2 / N-Linked
(avg mass : 2735.5035)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:6 HexNAc:6 dHex:3 / N-Linked
(avg mass : 2648.4687)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:6 dHex:1 NeuAc:1 / N-Linked
(avg mass : 2485.2982)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:7 HexNAc:6 / N-Linked
(avg mass : 2372.1821)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:4 dHex:3 NeuAc:1 / N-Linked
(avg mass : 2371.1942)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:5 dHex:3 / N-Linked
(avg mass : 2283.1313)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:5 dHex:2 NeuAc:1 / N-Linked
(avg mass : 2266.1038)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:6 dHex:3 / N-Linked
(avg mass : 2162.0415)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:5 dHex:1 NeuAc:1 / N-Linked
(avg mass : 2119.9608)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:4 dHex:3 / N-Linked
(avg mass : 2079.9363)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:4 dHex:1 NeuAc:1 / N-Linked
(avg mass : 2078.9082)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:6 dHex:2 / N-Linked
(avg mass : 2015.8985)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:5 dHex:1 / N-Linked
(avg mass : 1990.8453)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:5 dHex:2 / N-Linked
(avg mass : 1974.8459)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:5 dHex:1 NeuAc:1 / N-Linked
(avg mass : 1957.8184)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:4 dHex:1 NeuAc:1 / N-Linked
(avg mass : 1916.7658)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:5 dHex:1 / N-Linked
(avg mass : 1828.7029)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:4 dHex:2 / N-Linked
(avg mass : 1771.6509)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:8 HexNAc:2 / N-Linked
(avg mass : 1721.5445)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:5 dHex:1 / N-Linked
(avg mass : 1666.5605)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:4 / N-Linked
(avg mass : 1641.5073)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:4 HexNAc:4 dHex:1 / N-Linked
(avg mass : 1625.5079)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:3 dHex:1 / N-Linked
(avg mass : 1584.4553)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:4 dHex:1 / N-Linked
(avg mass : 1463.3655)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:3 / N-Linked
(avg mass : 1438.3123)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:6 HexNAc:2 / N-Linked
(avg mass : 1397.2597)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:3 dHex:1 / N-Linked
(avg mass : 1260.1705)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:2 / N-Linked
(avg mass : 1235.1173)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:3 HexNAc:3 / N-Linked
(avg mass : 1114.0275)
Source
Disease
Reported glycosite
Mass spectrometry observed peptide
- O-Linked / Core 0
(avg mass : 221.2103)