taxonomy (5)
protein (8)
source (10)
structure (9)
composition (1)
disease (7)
reference (9)
site (9)
peptide (4)
- Homo sapiens (Human)
- Mus musculus (House mouse)
- Ovis aries (Sheep)
- Rattus norvegicus (Norway rat)
- Sus scrofa (Pig)
Taxonomy
- Alpha-1-antitrypsin / Homo sapiens P01009
- CD59 glycoprotein / Homo sapiens P13987
- Epidermal growth factor receptor / Homo sapiens P00533
- Protein AMBP / Homo sapiens P02760
- Unspecified mucin / Homo sapiens
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries Q712V9
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries Q712V9
- Mucin / Sus scrofa
Protein
- Brain (UBERON_0000955)
- Cerebellum (UBERON_0002037)
- Cerebrospinal Fluid (UBERON_0001359)
- Frontal Cortex (UBERON_0001870)
- Hippocampul formation (UBERON:0002421)
- Mammalian Vulva (UBERON_0000997) A-431 (CVCL_0037)
- Prefrontal Cortex (UBERON:0000451)
- Pulmonary Mucosa
- Striatum (UBERON_0002345)
- Urine (UBERON_0001088)
Source
- N-Linked / Complex / GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc+"+ Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4) + Fuc(a1-2)Gal(b1-4)"
- N-Linked / Complex / Structure 9986
- N-Linked / Complex / Structure 11469
- N-Linked / Complex / Structure 11649
- N-Linked / Complex / Structure 11687
- N-Linked / Complex / Structure 11773
- N-Linked / Complex / Structure 11845
- O-Linked / Core 2 / Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-3)[Fuc(a1-2)Gal(b1-4)GlcNAc(b1-6)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-3)[Fuc(a1-2)Gal(b1-4)GlcNAc(b1-6)]GalNAc
- O-Linked / Core 2 / Fuc(a1-2)Gal(b1-4)GlcNAc(b1-6)[Fuc(a1-2)Gal(b1-?)GlcNAc(b1-3)]Gal(b1-?)GlcNAc(b1-3)Gal(b1-3)[Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-6)]GalNAc
Reported structure
- Hex:5 HexNAc:6 dHex:3 (avg mass : 2486.3263 )
Composition
- Alzheimer's disease (DOID:10652)
- Carcinoma, Squamous cell (DOID:1749)
- Control/Healthy
- Cystic Fibrosis (DOID:1485)
- Mild Cognitive Impairment (DOID:0080832)
- Prostate cancer (DOID:10283)
- Scrapie (DOID:5434)
Disease
- Mammalian brain glycoproteins exhibit diminished glycan complexity compared to other tissues (2022 - Williams SE, Noel M, Lehoux S, Cetinbas M, Xavier RJ, Sadreyev RI, Scolnick EM, Smoller JW, Cummings RD, Mealer RG) / Status : Reviewed
- Site-specific analysis of N-glycans from different sheep prion strains (2021 - Natali Nakić ,Thanh Hoa Tran ,Mislav Novokmet,Olivier Andreoletti,Gordan Lauc,Giuseppe Legname) / Status : Reviewed
- Spatial and temporal diversity of glycome expression in mammalian brain (2020 - Lee J, Ha S, Kim M, Kim SW, Yun J, Ozcan S, Hwang H, Ji IJ, Yin D, Webster MJ, Shannon Weickert C, Kim JH, Yoo JS, Grimm R, Bahn S, Shin HS, An HJ) / Status : Reviewed
- Distinct urinary glycoprotein signatures in prostate cancer patients (2018 - Rebeca Kawahara, Fabio Ortega, Livia Rosa-Fernandes, Vanessa Guimarães, Daniel Quina, Willian Nahas, Veit Schwämmle, Miguel Srougi, Katia R.M. Leite, Morten Thaysen-Andersen, Martin R. Larsen and Giuseppe Palmisano) / Status : Unreviewed
- CSF N-glycoproteomics for early diagnosis in Alzheimer's disease (2016 - Palmigiano A, Barone R, Sturiale L, Sanfilippo C, Bua RO, Romeo DA, Messina A, Capuana ML, Maci T, Le Pira F, Zappia M, Garozzo D) / Status : Reviewed
- Characterization of the carbohydrate chains of the secreted form of the human epidermal growth factor receptor. (2000 - Stroop C, Weber W, Gerwig G, Nimtz M, Kamerling J, Vliegenthart J) / Status : Reviewed
- Neutral N-glycans in adult rat brain tissue--complete characterisation reveals fucosylated hybrid and complex structures (1998 - Chen YJ, Wing DR, Guile GR, Dwek RA, Harvey DJ, Zamze S) / Status : Reviewed
- Quantitation and structures of oligosaccharide chains in human trachea mucin glycoproteins. (1992 - Sangadala S, Bhat U, Mendicino J) / Status : Reviewed
- Structures of the oligosaccharide chains in swine trachea mucin glycoproteins. (1984 - Chandrasekaran EV, Rana SS, Davila M, Mendicino J) / Status : Reviewed
Reference
- Alpha-1-antitrypsin / Homo sapiens
- CD59 glycoprotein / Homo sapiens
-
Epidermal growth factor receptor / Homo sapiens
- Undefined site
- Protein AMBP / Homo sapiens
-
Unspecified mucin / Homo sapiens
- Undefined site
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
-
Mucin / Sus scrofa
- Undefined site
Reported glycosite
- TAVNCSSDFDACLITK (16aa)
- YPNQVYYRPVDQYSNQNNFVHDCVNITVK (29aa)
- YFYNGTSMACETFQYGGCMGNGNNFVTEK (29aa)
- YLGNATAIFFLPDEGK (16aa)
Mass spectrometry observed peptide
-
- N-Linked / Complex
(avg mass : 2486.3263)
- Carcinoma, Squamous cell (DOID:1749)
-
Epidermal growth factor receptor / Homo sapiens
- Undefined site
-
- N-Linked / Complex
(avg mass : 2486.3263)
- Brain (UBERON_0000955)
- Scrapie (DOID:5434)
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- YPNQVYYRPVDQYSNQNNFVHDCVNITVK (29aa)
-
- N-Linked / Complex
(avg mass : 2486.3263)
-
- N-Linked / Complex
(avg mass : 2486.3263)
- Cerebellum (UBERON_0002037)
- Frontal Cortex (UBERON_0001870)
- Hippocampul formation (UBERON:0002421)
- Striatum (UBERON_0002345)
-
- N-Linked / Complex
(avg mass : 2486.3263)
-
- N-Linked / Complex
(avg mass : 2486.3263)
-
- N-Linked / Complex
(avg mass : 2486.3263)
- Brain (UBERON_0000955)
-
- O-Linked / Core 2
(avg mass : 2486.3263)
- Pulmonary Mucosa
-
Mucin / Sus scrofa
- Undefined site
-
- O-Linked / Core 2
(avg mass : 2486.3263)
- Pulmonary Mucosa
- Cystic Fibrosis (DOID:1485)
-
Unspecified mucin / Homo sapiens
- Undefined site
-
- Hex:5 HexNAc:6 dHex:3 / O-Linked
(avg mass : 2486.3263)
- Urine (UBERON_0001088)
- O-Linked / Core 2 / Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-3)[Fuc(a1-2)Gal(b1-4)GlcNAc(b1-6)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-3)[Fuc(a1-2)Gal(b1-4)GlcNAc(b1-6)]GalNAc
- O-Linked / Core 2 / Fuc(a1-2)Gal(b1-4)GlcNAc(b1-6)[Fuc(a1-2)Gal(b1-?)GlcNAc(b1-3)]Gal(b1-?)GlcNAc(b1-3)Gal(b1-3)[Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-6)]GalNAc
- Prostate cancer (DOID:10283)
- Alpha-1-antitrypsin / Homo sapiens
- CD59 glycoprotein / Homo sapiens
- Protein AMBP / Homo sapiens
- TAVNCSSDFDACLITK (16aa)
- YFYNGTSMACETFQYGGCMGNGNNFVTEK (29aa)
- YLGNATAIFFLPDEGK (16aa)
Source
Suggested structure
Disease
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:6 dHex:3 / O-Linked
(avg mass : 2486.3263)
Source
Disease
Reported glycosite
- O-Linked / Core 2
(avg mass : 2486.3263)
Source
Reported glycosite
- O-Linked / Core 2
(avg mass : 2486.3263)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2486.3263)
Reported glycosite
- N-Linked / Complex
(avg mass : 2486.3263)
Reported glycosite
- N-Linked / Complex
(avg mass : 2486.3263)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2486.3263)
Reported glycosite
- N-Linked / Complex
(avg mass : 2486.3263)
Source
Disease
Reported glycosite
Mass spectrometry observed peptide
- N-Linked / Complex
(avg mass : 2486.3263)
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2486.3263)