taxonomy (4)
protein (21)
source (13)
structure (7)
composition (1)
disease (5)
reference (11)
site (29)
peptide (24)
- Homo sapiens (Human)
- Mus musculus (House mouse)
- Ovis aries (Sheep)
- Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
Taxonomy
- Biglycan / Homo sapiens P21810
- Chymotrypsin-like elastase family member 3B / Homo sapiens P08861
- Clusterin / Homo sapiens P10909
- Epidermal growth factor receptor / Homo sapiens P00533
- Fibrillin-1 / Homo sapiens P35555
- Immunoglobulin heavy constant alpha 2 / Homo sapiens P01877
- Lumican / Homo sapiens P51884
- Lysosome-associated membrane glycoprotein 1 / Homo sapiens P11279
- Macrosialin / Homo sapiens P34810
- Olfactomedin-like protein 3 / Homo sapiens Q9NRN5
- Palmitoyl-protein thioesterase 1 / Homo sapiens P50897
- Prolactin-inducible protein / Homo sapiens P12273
- Prostaglandin-h2 d-isomerase / Homo sapiens P41222
- Protein AMBP / Homo sapiens P02760
- Thrombospondin-1 / Homo sapiens P07996
- Transmembrane emp24 domain-containing protein 7 / Homo sapiens Q9Y3B3
- Uromodulin / Homo sapiens P07911
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries Q712V9
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries Q712V9
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
Protein
- Blood Serum (UBERON_0001977)
- Brain (UBERON_0000955)
- Cerebellum (UBERON_0002037)
- Frontal Cortex (UBERON_0001870)
- Hippocampul formation (UBERON:0002421)
- Mammalian Vulva (UBERON_0000997) A-431 (CVCL_0037)
- Mammary Gland (UBERON_0001911)
- Pancreas (UBERON_0001264)
- Prefrontal Cortex (UBERON:0000451)
- Striatum (UBERON_0002345)
- Urine (UBERON_0001088)
- FreeStyle 293-F (CVCL_D603)
- HEK293 (CVCL_0045)
Source
- N-Linked / Complex / Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc+"+ Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4) + Gal(b1-4)"
- N-Linked / Complex / Structure 9968
- N-Linked / Complex / Structure 9973
- N-Linked / Complex / Structure 11662
- N-Linked / Complex / Structure 11683
- N-Linked / Complex / Structure 11819
Reported structure
- Hex:5 HexNAc:6 dHex:2 (avg mass : 2340.1833 )
Composition
- Cancer, breast (DOID:1612)
- Carcinoma, Squamous cell (DOID:1749)
- COVID-19 (DOID:0080600)
- Prostate cancer (DOID:10283)
- Scrapie (DOID:5434)
Disease
- Mammalian brain glycoproteins exhibit diminished glycan complexity compared to other tissues (2022 - Williams SE, Noel M, Lehoux S, Cetinbas M, Xavier RJ, Sadreyev RI, Scolnick EM, Smoller JW, Cummings RD, Mealer RG) / Status : Reviewed
- Direct Comparison of N-Glycans and Their Isomers Derived from Spike Glycoprotein 1 of MERS-CoV, SARS-CoV-1, and SARS-CoV-2 (2021 - Cho BG, Gautam S, Peng W, Huang Y, Goli M, Mechref Y) / Status : Reviewed
- Site-specific analysis of N-glycans from different sheep prion strains (2021 - Natali Nakić ,Thanh Hoa Tran ,Mislav Novokmet,Olivier Andreoletti,Gordan Lauc,Giuseppe Legname) / Status : Reviewed
- Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed
- Site-specific glycan analysis of the SARS-CoV-2 spike (2020 - Yasunori Watanabe, Joel D. Allen, Daniel Wrapp, Jason S. McLellan, Max Crispin) / Status : Unreviewed
- Spatial and temporal diversity of glycome expression in mammalian brain (2020 - Lee J, Ha S, Kim M, Kim SW, Yun J, Ozcan S, Hwang H, Ji IJ, Yin D, Webster MJ, Shannon Weickert C, Kim JH, Yoo JS, Grimm R, Bahn S, Shin HS, An HJ) / Status : Reviewed
- Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed
- Distinct urinary glycoprotein signatures in prostate cancer patients (2018 - Rebeca Kawahara, Fabio Ortega, Livia Rosa-Fernandes, Vanessa Guimarães, Daniel Quina, Willian Nahas, Veit Schwämmle, Miguel Srougi, Katia R.M. Leite, Morten Thaysen-Andersen, Martin R. Larsen and Giuseppe Palmisano) / Status : Unreviewed
- Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis (2014 - Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P) / Status : Reviewed
- Characterization of the carbohydrate chains of the secreted form of the human epidermal growth factor receptor. (2000 - Stroop C, Weber W, Gerwig G, Nimtz M, Kamerling J, Vliegenthart J) / Status : Reviewed
- Carbohydrate structure of human pancreatic elastase 1. (1991 - Wendorf P, Linder D, Sziegoleit A, Geyer R) / Status : Reviewed
Reference
- Biglycan / Homo sapiens
- Chymotrypsin-like elastase family member 3B / Homo sapiens
- Clusterin / Homo sapiens
-
Epidermal growth factor receptor / Homo sapiens
- Undefined site
- Fibrillin-1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Lumican / Homo sapiens
- Lysosome-associated membrane glycoprotein 1 / Homo sapiens
- Macrosialin / Homo sapiens
- Olfactomedin-like protein 3 / Homo sapiens
- Palmitoyl-protein thioesterase 1 / Homo sapiens
- Prolactin-inducible protein / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Protein AMBP / Homo sapiens
- Thrombospondin-1 / Homo sapiens
- Transmembrane emp24 domain-containing protein 7 / Homo sapiens
- Uromodulin / Homo sapiens
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
Reported glycosite
- QCVNLTTR (8aa)
- SVVAPATDGGLNLTSTFLR (19aa)
- KQYDSFTFTASKNGTYK (17aa)
- ELPGVCNETMMALWEECKPCLK (22aa)
- TFYWDFYTNR (10aa)
- KLHINHNNLTESVGPLPK (18aa)
- LHINHNNLTESVGPLPK (17aa)
- YPNQVYYRPVDQYSNQNNFVHDCVNITVK (29aa)
- AWGISVLNPNK (11aa)
- GENFTETDIK (10aa)
- FINDSIVDPVDSEWFGFYR (19aa)
- FHLANR (6aa)
- KDNTTVTR (8aa)
- YFYNGTSMACETFQYGGCMGNGNNFVTEK (29aa)
- IIQVVYIHSNNITK (14aa)
- RFPNIT (6aa)
- FPNIT (5aa)
- GEVFNATR (8aa)
- MINTSSIIEQINEQFNWVSR (20aa)
- FALLMTNCYATPSSNATDPLK (21aa)
- VVNSTTGPGEHIR (13aa)
- NGTHWFVT (8aa)
- AWGTPCEMCPAVNTSEYK (18aa)
- NYYADNQTCDGELLFNMTK (19aa)
Mass spectrometry observed peptide
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Pancreas (UBERON_0001264)
- Chymotrypsin-like elastase family member 3B / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Carcinoma, Squamous cell (DOID:1749)
-
Epidermal growth factor receptor / Homo sapiens
- Undefined site
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Brain (UBERON_0000955)
- Scrapie (DOID:5434)
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- YPNQVYYRPVDQYSNQNNFVHDCVNITVK (29aa)
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Brain (UBERON_0000955)
- HEK293 (CVCL_0045)
- COVID-19 (DOID:0080600)
- Scrapie (DOID:5434)
- Site-specific analysis of N-glycans from different sheep prion strains (2021 - Natali Nakić ,Thanh Hoa Tran ,Mislav Novokmet,Olivier Andreoletti,Gordan Lauc,Giuseppe Legname) / Status : Reviewed
- Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- GENFTETDIK (10aa)
- FPNIT (5aa)
-
- N-Linked / Complex
(avg mass : 2340.1833)
-
- N-Linked / Complex
(avg mass : 2340.1833)
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Cerebellum (UBERON_0002037)
- Frontal Cortex (UBERON_0001870)
- Hippocampul formation (UBERON:0002421)
- Striatum (UBERON_0002345)
-
- Hex:5 HexNAc:6 dHex:2 / N-Linked
(avg mass : 2340.1833)
- Blood Serum (UBERON_0001977)
- Mammary Gland (UBERON_0001911)
- Urine (UBERON_0001088)
- FreeStyle 293-F (CVCL_D603)
- HEK293 (CVCL_0045)
- N-Linked / Complex / Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc+"+ Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4) + Gal(b1-4)"
- N-Linked / Complex / Structure 9968
- N-Linked / Complex / Structure 9973
- N-Linked / Complex / Structure 11662
- N-Linked / Complex / Structure 11683
- N-Linked / Complex / Structure 11819
- Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed
- Site-specific glycan analysis of the SARS-CoV-2 spike (2020 - Yasunori Watanabe, Joel D. Allen, Daniel Wrapp, Jason S. McLellan, Max Crispin) / Status : Unreviewed
- Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed
- Distinct urinary glycoprotein signatures in prostate cancer patients (2018 - Rebeca Kawahara, Fabio Ortega, Livia Rosa-Fernandes, Vanessa Guimarães, Daniel Quina, Willian Nahas, Veit Schwämmle, Miguel Srougi, Katia R.M. Leite, Morten Thaysen-Andersen, Martin R. Larsen and Giuseppe Palmisano) / Status : Unreviewed
- Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis (2014 - Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P) / Status : Reviewed
- Biglycan / Homo sapiens
- Clusterin / Homo sapiens
- Fibrillin-1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Lumican / Homo sapiens
- Lysosome-associated membrane glycoprotein 1 / Homo sapiens
- Macrosialin / Homo sapiens
- Olfactomedin-like protein 3 / Homo sapiens
- Palmitoyl-protein thioesterase 1 / Homo sapiens
- Prolactin-inducible protein / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Protein AMBP / Homo sapiens
- Thrombospondin-1 / Homo sapiens
- Transmembrane emp24 domain-containing protein 7 / Homo sapiens
- Uromodulin / Homo sapiens
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- QCVNLTTR (8aa)
- SVVAPATDGGLNLTSTFLR (19aa)
- KQYDSFTFTASKNGTYK (17aa)
- ELPGVCNETMMALWEECKPCLK (22aa)
- TFYWDFYTNR (10aa)
- KLHINHNNLTESVGPLPK (18aa)
- LHINHNNLTESVGPLPK (17aa)
- AWGISVLNPNK (11aa)
- FINDSIVDPVDSEWFGFYR (19aa)
- FHLANR (6aa)
- KDNTTVTR (8aa)
- YFYNGTSMACETFQYGGCMGNGNNFVTEK (29aa)
- IIQVVYIHSNNITK (14aa)
- RFPNIT (6aa)
- GEVFNATR (8aa)
- MINTSSIIEQINEQFNWVSR (20aa)
- FALLMTNCYATPSSNATDPLK (21aa)
- VVNSTTGPGEHIR (13aa)
- NGTHWFVT (8aa)
- AWGTPCEMCPAVNTSEYK (18aa)
- NYYADNQTCDGELLFNMTK (19aa)
-
- Hex:5 HexNAc:6 dHex:2 / Undefined type
(avg mass : 2340.1833)
- HEK293 (CVCL_0045)
- COVID-19 (DOID:0080600)
-
Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- Undefined site
Source
Suggested structure
Disease
Reported glycosite
- Hex:5 HexNAc:6 dHex:2 / Undefined type
(avg mass : 2340.1833)
Source
Suggested structure
Reference
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:6 dHex:2 / N-Linked
(avg mass : 2340.1833)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
Source
Disease
Reference
Reported glycosite
Mass spectrometry observed peptide
- N-Linked / Complex
(avg mass : 2340.1833)
Source
Disease
Reported glycosite
Mass spectrometry observed peptide
- N-Linked / Complex
(avg mass : 2340.1833)
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
