taxonomy (3)
protein (21)
source (8)
structure (4)
composition (1)
disease (5)
reference (8)
site (28)
peptide (24)
- Homo sapiens (Human)
- Ovis aries (Sheep)
- Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
Taxonomy
- Biglycan / Homo sapiens P21810
- Chymotrypsin-like elastase family member 3B / Homo sapiens P08861
- Clusterin / Homo sapiens P10909
- Epidermal growth factor receptor / Homo sapiens P00533
- Fibrillin-1 / Homo sapiens P35555
- Immunoglobulin heavy constant alpha 2 / Homo sapiens P01877
- Lumican / Homo sapiens P51884
- Lysosome-associated membrane glycoprotein 1 / Homo sapiens P11279
- Macrosialin / Homo sapiens P34810
- Olfactomedin-like protein 3 / Homo sapiens Q9NRN5
- Palmitoyl-protein thioesterase 1 / Homo sapiens P50897
- Prolactin-inducible protein / Homo sapiens P12273
- Prostaglandin-h2 d-isomerase / Homo sapiens P41222
- Protein AMBP / Homo sapiens P02760
- Thrombospondin-1 / Homo sapiens P07996
- Transmembrane emp24 domain-containing protein 7 / Homo sapiens Q9Y3B3
- Uromodulin / Homo sapiens P07911
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries Q712V9
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries Q712V9
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) P0DTC2
Protein
- Blood Serum (UBERON_0001977)
- Brain (UBERON_0000955)
- Mammalian Vulva (UBERON_0000997) A-431 (CVCL_0037)
- Mammary Gland (UBERON_0001911)
- Pancreas (UBERON_0001264)
- Urine (UBERON_0001088)
- FreeStyle 293-F (CVCL_D603)
- HEK293 (CVCL_0045)
Source
- N-Linked / Complex / Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc+"+ Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4) + Gal(b1-4)"
- N-Linked / Complex / Structure 9968
- N-Linked / Complex / Structure 9973
Reported structure
- Hex:5 HexNAc:6 dHex:2 (avg mass : 2340.1833 )
Composition
- Cancer, breast (DOID:1612)
- Carcinoma, Squamous cell (DOID:1749)
- COVID-19 (DOID:0080600)
- Prostate cancer (DOID:10283)
- Scrapie (DOID:5434)
Disease
- Site-specific analysis of N-glycans from different sheep prion strains (2021 - Natali Nakić ,Thanh Hoa Tran ,Mislav Novokmet,Olivier Andreoletti,Gordan Lauc,Giuseppe Legname) / Status : Reviewed
- Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed
- Site-specific glycan analysis of the SARS-CoV-2 spike (2020 - Yasunori Watanabe, Joel D. Allen, Daniel Wrapp, Jason S. McLellan, Max Crispin) / Status : Unreviewed
- Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed
- Distinct urinary glycoprotein signatures in prostate cancer patients (2018 - Rebeca Kawahara, Fabio Ortega, Livia Rosa-Fernandes, Vanessa Guimarães, Daniel Quina, Willian Nahas, Veit Schwämmle, Miguel Srougi, Katia R.M. Leite, Morten Thaysen-Andersen, Martin R. Larsen and Giuseppe Palmisano) / Status : Unreviewed
- Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis (2014 - Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P) / Status : Reviewed
- Characterization of the carbohydrate chains of the secreted form of the human epidermal growth factor receptor. (2000 - Stroop C, Weber W, Gerwig G, Nimtz M, Kamerling J, Vliegenthart J) / Status : Reviewed
- Carbohydrate structure of human pancreatic elastase 1. (1991 - Wendorf P, Linder D, Sziegoleit A, Geyer R) / Status : Reviewed
Reference
- Biglycan / Homo sapiens
- Chymotrypsin-like elastase family member 3B / Homo sapiens
- Clusterin / Homo sapiens
-
Epidermal growth factor receptor / Homo sapiens
- Undefined site
- Fibrillin-1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Lumican / Homo sapiens
- Lysosome-associated membrane glycoprotein 1 / Homo sapiens
- Macrosialin / Homo sapiens
- Olfactomedin-like protein 3 / Homo sapiens
- Palmitoyl-protein thioesterase 1 / Homo sapiens
- Prolactin-inducible protein / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Protein AMBP / Homo sapiens
- Thrombospondin-1 / Homo sapiens
- Transmembrane emp24 domain-containing protein 7 / Homo sapiens
- Uromodulin / Homo sapiens
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
Reported glycosite
- QCVNLTTR (8aa)
- SVVAPATDGGLNLTSTFLR (19aa)
- KQYDSFTFTASKNGTYK (17aa)
- ELPGVCNETMMALWEECKPCLK (22aa)
- TFYWDFYTNR (10aa)
- KLHINHNNLTESVGPLPK (18aa)
- LHINHNNLTESVGPLPK (17aa)
- YPNQVYYRPVDQYSNQNNFVHDCVNITVK (29aa)
- AWGISVLNPNK (11aa)
- GENFTETDIK (10aa)
- FINDSIVDPVDSEWFGFYR (19aa)
- FHLANR (6aa)
- KDNTTVTR (8aa)
- YFYNGTSMACETFQYGGCMGNGNNFVTEK (29aa)
- IIQVVYIHSNNITK (14aa)
- RFPNIT (6aa)
- FPNIT (5aa)
- GEVFNATR (8aa)
- MINTSSIIEQINEQFNWVSR (20aa)
- FALLMTNCYATPSSNATDPLK (21aa)
- VVNSTTGPGEHIR (13aa)
- NGTHWFVT (8aa)
- AWGTPCEMCPAVNTSEYK (18aa)
- NYYADNQTCDGELLFNMTK (19aa)
Mass spectrometry observed peptide
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Pancreas (UBERON_0001264)
- Chymotrypsin-like elastase family member 3B / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Carcinoma, Squamous cell (DOID:1749)
-
Epidermal growth factor receptor / Homo sapiens
- Undefined site
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Brain (UBERON_0000955)
- Scrapie (DOID:5434)
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- YPNQVYYRPVDQYSNQNNFVHDCVNITVK (29aa)
-
- N-Linked / Complex
(avg mass : 2340.1833)
- Brain (UBERON_0000955)
- HEK293 (CVCL_0045)
- COVID-19 (DOID:0080600)
- Scrapie (DOID:5434)
- Site-specific analysis of N-glycans from different sheep prion strains (2021 - Natali Nakić ,Thanh Hoa Tran ,Mislav Novokmet,Olivier Andreoletti,Gordan Lauc,Giuseppe Legname) / Status : Reviewed
- Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed
- Major prion protein (VRQ/VRQ polymorphism) 21K slow variant / Ovis aries
- Major prion protein (VRQ/VRQ polymorphism) CH1641 variant / Ovis aries
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- GENFTETDIK (10aa)
- FPNIT (5aa)
-
- Hex:5 HexNAc:6 dHex:2 / N-Linked
(avg mass : 2340.1833)
- Blood Serum (UBERON_0001977)
- Mammary Gland (UBERON_0001911)
- Urine (UBERON_0001088)
- FreeStyle 293-F (CVCL_D603)
- HEK293 (CVCL_0045)
- N-Linked / Complex / Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4)GlcNAc(b1-2)Man(a1-3)[Gal(b1-4)GlcNAc(b1-2)Man(a1-6)][GlcNAc(b1-4)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / GlcNAc(b1-2)[GlcNAc(b1-6)]Man(a1-6)[GlcNAc(b1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc+"+ Fuc(a1-2)[GalNAc(a1-3)]Gal(b1-4) + Gal(b1-4)"
- N-Linked / Complex / Structure 9968
- N-Linked / Complex / Structure 9973
- Structural and functional characterization of SARS-CoV-2 RBD domains produced in mammalian cells (2021 - Christoph Gstöttner, Tao Zhang, Anja Resemann, Sophia Ruben, Stuart Pengelley, Detlev Suckau, Tim Welsink, Manfred Wuhrer, Elena Domínguez-Vega) / Status : Reviewed
- Site-specific glycan analysis of the SARS-CoV-2 spike (2020 - Yasunori Watanabe, Joel D. Allen, Daniel Wrapp, Jason S. McLellan, Max Crispin) / Status : Unreviewed
- Reanalysis of global proteomic and phosphoproteomic data identified a large number of glycopeptides (2018 - Yingwei Hu, Punit Shah, David J. Clark, Minghui Ao, Hui Zhang) / Status : Unreviewed
- Distinct urinary glycoprotein signatures in prostate cancer patients (2018 - Rebeca Kawahara, Fabio Ortega, Livia Rosa-Fernandes, Vanessa Guimarães, Daniel Quina, Willian Nahas, Veit Schwämmle, Miguel Srougi, Katia R.M. Leite, Morten Thaysen-Andersen, Martin R. Larsen and Giuseppe Palmisano) / Status : Unreviewed
- Efficient and accurate glycopeptide identification pipeline for high-throughput site-specific N-glycosylation analysis (2014 - Liu M, Zhang Y, Chen Y, Yan G, Shen C, Cao J, Zhou X, Liu X, Zhang L, Shen H, Lu H, He F, Yang P) / Status : Reviewed
- Biglycan / Homo sapiens
- Clusterin / Homo sapiens
- Fibrillin-1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Lumican / Homo sapiens
- Lysosome-associated membrane glycoprotein 1 / Homo sapiens
- Macrosialin / Homo sapiens
- Olfactomedin-like protein 3 / Homo sapiens
- Palmitoyl-protein thioesterase 1 / Homo sapiens
- Prolactin-inducible protein / Homo sapiens
- Prostaglandin-h2 d-isomerase / Homo sapiens
- Protein AMBP / Homo sapiens
- Thrombospondin-1 / Homo sapiens
- Transmembrane emp24 domain-containing protein 7 / Homo sapiens
- Uromodulin / Homo sapiens
- Recombinant Spike glycoprotein (FreeStyle 293-F) / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- Recombinant Spike glycoprotein (HEK293) - RBD domain / Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)
- QCVNLTTR (8aa)
- SVVAPATDGGLNLTSTFLR (19aa)
- KQYDSFTFTASKNGTYK (17aa)
- ELPGVCNETMMALWEECKPCLK (22aa)
- TFYWDFYTNR (10aa)
- KLHINHNNLTESVGPLPK (18aa)
- LHINHNNLTESVGPLPK (17aa)
- AWGISVLNPNK (11aa)
- FINDSIVDPVDSEWFGFYR (19aa)
- FHLANR (6aa)
- KDNTTVTR (8aa)
- YFYNGTSMACETFQYGGCMGNGNNFVTEK (29aa)
- IIQVVYIHSNNITK (14aa)
- RFPNIT (6aa)
- GEVFNATR (8aa)
- MINTSSIIEQINEQFNWVSR (20aa)
- FALLMTNCYATPSSNATDPLK (21aa)
- VVNSTTGPGEHIR (13aa)
- NGTHWFVT (8aa)
- AWGTPCEMCPAVNTSEYK (18aa)
- NYYADNQTCDGELLFNMTK (19aa)
Source
Suggested structure
Reference
Reported glycosite
Mass spectrometry observed peptide
- Hex:5 HexNAc:6 dHex:2 / N-Linked
(avg mass : 2340.1833)
Source
Disease
Reference
Reported glycosite
Mass spectrometry observed peptide
- N-Linked / Complex
(avg mass : 2340.1833)
Source
Disease
Reported glycosite
Mass spectrometry observed peptide
- N-Linked / Complex
(avg mass : 2340.1833)
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
Source
Reported glycosite
- N-Linked / Complex
(avg mass : 2340.1833)
