Cell Wall

Taxonomy

• Daucus carota (Carrot)
• Chlamydomonas reinhardtii
• Sulfolobus acidocaldarius

Protein

• Beta-fructofuranosidase, insoluble isoenzyme 1 / Daucus carota    P26792
• Vegetative cell wall protein gp1 / Chlamydomonas reinhardtii    Q9FPQ6
• Cytochrome b558/566 / Sulfolobus acidocaldarius    O54088

Source

• Somatic Cell (CL_0002371)   Cell Wall (GO_0005618)  
• Cell Wall (GO_0005618)  

Reported structure

• O-Linked / No-core / Pent
• O-Linked/C-Linked / No-core / Man
• O-Linked / No-core / Pent(?1-?)Pent
• O-Linked / No-core / Hex(?1-?)Pent
• O-Linked / No-core / Hex(?1-?)[Pent(?1-?)]Pent
• O-Linked / No-core / Hex(?1-?)Pent(?1-?)Pent
• O-Linked / No-core / Me(-?)Hex(?1-?)Pent(?1-?)Pent
• O-Linked / No-core / Hex(?1-?)[Pent(?1-?)]Pent(?1-?)Pent
• O-Linked / No-core / Hex(?1-?)Pent(?1-?)Pent(?1-?)Pent
• O-Linked / No-core / Pent(?1-?)Hex(?1-?)Pent(?1-?)Pent
• O-Linked / No-core / Me(-?)Pent(?1-?)Hex(?1-?)Pent(?1-?)Pent
• O-Linked / No-core / Hex(?1-?)Pent(?1-?)[Hex(?1-?)]Pent
• O-Linked / No-core / Me(-?)Hex(?1-?)[Hex(?1-?)]Pent(?1-?)Pent
• N-Linked / No-core / Glc(b1-4)[HSO3(-6)]Qui(b1-3)[Man(a1-4)][Man(a1-6)]GlcNAc(b1-4)GlcNAc
• N-Linked / Pauci-Mannose / Man(a1-3)[Man(a1-6)][Xyl(b1-2)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-3)]GlcNAc
• N-Linked / Complex / GlcNAc(b1-?)Man(a1-?)[Man(a1-?)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc
• N-Linked / Complex / Ara(?1-?)[GlcNAc(b1-?)]Man(a1-?)[Man(a1-?)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc
• N-Linked / Complex / Ara(?1-?)Man(a1-?)[GlcNAc(b1-?)Man(a1-?)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc
• N-Linked / Complex / GlcNAc(b1-?)Man(a1-3)[GlcNAc(b1-?)Man(a1-6)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc
• N-Linked / Complex / Ara(?1-?)[GlcNAc(b1-?)]Man(a1-?)[Ara(?1-?)Man(a1-?)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc
• N-Linked / High-Mannose / Man(a1-2)Man(a1-6)[Man(a1-3)]Man(a1-6)[Man(a1-2)Man(a1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
• N-Linked / Complex / Ara(?1-?)[GlcNAc(b1-?)]Man(a1-?)[GlcNAc(b1-?)Man(a1-?)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc
• N-Linked / Complex / Ara(?1-?)[GlcNAc(b1-?)]Man(a1-3)[Ara(?1-?)[GlcNAc(b1-?)]Man(a1-6)][Xyl(?1-?)]Man(b1-4)GlcNAc(b1-4)[Fuc(?1-?)]GlcNAc

Composition

• Pent:1 (avg mass : 150.1314 )
• Pent:2 (avg mass : 282.2475 )
• Hex:1 (avg mass : 180.1577 )
• Hex:1 Pent:1 (avg mass : 312.2738 )
• Hex:1 Pent:2 (avg mass : 444.3899 )
• Hex:1 Pent:2 Me:1 (avg mass : 458.4168 )
• Hex:1 Pent:3 (avg mass : 576.506 )
• Hex:1 Pent:3 Me:1 (avg mass : 590.5329 )
• Hex:2 Pent:2 (avg mass : 606.5323 )
• Hex:2 Pent:2 Me:1 (avg mass : 620.5592 )
• Hex:3 HexNAc:2 dHex:1 Su:1 (avg mass : 1137.0397 )
• Hex:3 HexNAc:2 dHex:1 Pent:1 (avg mass : 1189.0916 )
• Hex:3 HexNAc:3 dHex:1 Pent:1 (avg mass : 1392.2866 )
• Hex:3 HexNAc:3 dHex:1 Pent:2 (avg mass : 1524.4027 )
• Hex:3 HexNAc:3 dHex:1 Pent:3 (avg mass : 1656.5188 )
• Hex:3 HexNAc:4 dHex:1 Pent:1 (avg mass : 1595.4816 )
• Hex:3 HexNAc:4 dHex:1 Pent:2 (avg mass : 1727.5977 )
• Hex:3 HexNAc:4 dHex:1 Pent:3 (avg mass : 1859.7138 )
• Hex:8 HexNAc:2 (avg mass : 1721.5445 )

Disease

Reference

• Glycosylated polyproline II rods with kinks as a structural motif in plant hydroxyproline-rich glycoproteins (2001 - Ferris, Woessner, Waffenschmidt, Kilz, Drees, Goodenough) / Status : Reviewed
• Cytochrome b558/566 from the archaeon Sulfolobus acidocaldarius has a unique Asn-linked highly branched hexasaccharide chain containing 6-sulfoquinovose. (2000 - Zahringer U, Moll H, Hettmann T, Knirel Y, Schfer G) / Status : Reviewed
• Cytochrome b558/566 from the archaeon Sulfolobus acidocaldarius. A novel highly glycosylated, membrane-bound b-type hemoprotein. (1998 - Hettmann T, Schmidt C, Anemller S, Zhringer U, Moll H, Petersen A, Schfer G) / Status : Reviewed
• Heterogeneity of the complex N-linked oligosaccharides at specific glycosylation sites of two secreted carrot glycoproteins. (1991 - Sturm A) / Status : Reviewed

Reported glycosite

• Beta-fructofuranosidase, insoluble isoenzyme 1 / Daucus carota
  •        Asn-170
  •        Asn-311
  •        Asn-348
• Vegetative cell wall protein gp1 / Chlamydomonas reinhardtii
  •        Undefined site
• Cytochrome b558/566 / Sulfolobus acidocaldarius
  •        Undefined site

Mass spectrometry observed peptide