Core 2 glycan structure

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3D structure from GLYCAM

Cross-references

GlyTouCan : G41424HD

GlyGen : G41424HD

ChEBI : 150395


Composition

Hex:1 HexNAc:3 dHex:1


IUPAC

Fuc(a1-4)GlcNAc(b1-6)[GlcNAc(b1-3)Gal(b1-3)]GalNAc

GlycoCT

RES
1b:a-dgal-HEX-1:5
2s:n-acetyl
3b:b-dgal-HEX-1:5
4b:b-dglc-HEX-1:5
5s:n-acetyl
6b:b-dglc-HEX-1:5
7s:n-acetyl
8b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(3+1)4d
4:4d(2+1)5n
5:1o(6+1)6d
6:6d(2+1)7n
7:6o(4+1)8d

GWS

freeEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3b1D-GlcNAc,p)--6b1D-GlcNAc,p--4a1L-Fuc,p$MONO,Und,0,0,freeEnd

Glycam

DGlcpNAcb1-3DGalpb1-3[LFucpa1-4DGlcpNAcb1-6]DGalpNAca1-OH

SMILES

C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)NC(=O)C)OC[C@@H]3[C@@H]([C@@H]([C@H]([C@H](O3)O)NC(=O)C)O[C@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)NC(=O)C)O)O)CO)O)O)O

InCHI key

WARIAPVOMUAGJJ-FTKJKGLNSA-N

InCHI

InChI=1S/C36H61N3O25/c1-9-20(46)26(52)27(53)35(57-9)62-29-15(7-42)61-33(18(25(29)51)38-11(3)44)56-8-16-23(49)30(19(32(55)58-16)39-12(4)45)63-36-28(54)31(22(48)14(6-41)60-36)64-34-17(37-10(2)43)24(50)21(47)13(5-40)59-34/h9,13-36,40-42,46-55H,5-8H2,1-4H3,(H,37,43)(H,38,44)(H,39,45)/t9-,13+,14+,15+,16+,17+,18+,19+,20+,21+,22-,23-,24+,25+,26+,27-,28+,29+,30+,31-,32-,33+,34-,35-,36-/m0/s1