Complex glycan structure

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3D structure from GLYCAM

CAUTION : No direct structure evidence - needs to be confirmed by orthogonal methods.

Cross-references

GlyTouCan : G47447OK

GlyGen : G47447OK

ChEBI : -


Composition

Hex:6 HexNAc:4 dHex:3 NeuAc:1


IUPAC

Gal(b1-4)GlcNAc(b1-2)[Gal(b1-4)GlcNAc(b1-4)]Man(a1-3)[Fuc(a1-6)[Gal(b1-4)]GlcNAc(?1-2)Man(?1-6)]Man(?1-4)[Fuc(a1-3)Fuc(a1-3)]GlcNAc+"+ NeuAc(?2-6)"

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:a-lgal-HEX-1:5|6:d
4b:a-lgal-HEX-1:5|6:d
5b:x-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:b-dglc-HEX-1:5
8s:n-acetyl
9b:b-dgal-HEX-1:5
10b:b-dglc-HEX-1:5
11s:n-acetyl
12b:b-dgal-HEX-1:5
13b:x-dman-HEX-1:5
14b:x-dglc-HEX-1:5
15s:n-acetyl
16b:b-dgal-HEX-1:5
17b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:3o(3+1)4d
4:1o(4+1)5d
5:5o(3+1)6d
6:6o(2+1)7d
7:7d(2+1)8n
8:7o(4+1)9d
9:6o(4+1)10d
10:10d(2+1)11n
11:10o(4+1)12d
12:5o(6+1)13d
13:13o(2+1)14d
14:14d(2+1)15n
15:14o(4+1)16d
16:14o(6+1)17d
UND
UND1:100.0:100.0
ParentIDs:1|3|4|5|6|7|9|10|12|13|14|16|17
SubtreeLinkageID1:o(6+2)d
RES
18b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d
19s:n-acetyl
LIN
17:18d(5+1)19n

GWS

freeEnd--?b1D-GlcNAc,p(--3a1L-Fuc,p--3a1L-Fuc,p)--4?1D-Man,p(--3a1D-Man,p(--2b1D-GlcNAc,p--4b1D-Gal,p)--4b1D-GlcNAc,p--4b1D-Gal,p)--6?1D-Man,p--2?1D-GlcNAc,p(--4b1D-Gal,p)--6a1L-Fuc,p}--6?2D-NeuAc,p$MONO,Und,0,0,freeEnd